Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0223 ATGAAGGCTAATCTTCCTTTGTTGGTTTCCATGGTGGTTCTCGGTGTTCTTGGAGTGTGCCAAGGTGGTAGTCTAAGGAAGAAGTACTATAAGAGTGCGTGTCCTCTCGCAGAAGAGATTGTTCAGAAAGTAACGTGGCGGCATGTTTCAAGTAATCCCAATTTGCCCGCAAAGCTCATAAGAATGCACTTTCATGATTGTTTCGTTAGGGGCTGTGATGGATCGGTTTTGTTAAACTCAACTGCAAATAGTACTGCAGAGAGGGATGCAGCCCCAAATCTATCACTAGCAGGCTTCGATGTCATCGATGATATAAAATCACAGCTTGAGAAAACATGCCCCGGAGTTGTGTCTTGTGCCGATATATTGGCTTTGGCTTCAAGGGATTCGGTGTCGTTTCAATTCAAAAAACCGATGTGGGAGGTGCTTACTGGTAGAAGAGATGGCAAAGTATCGCTTGCTTCGGAGGCTCTTGCCAACATTCCCCCTCCTGTCTTCAATTTCAGCTCCCTCAAGCAAAGTTTTGCAAGTAAAGGCCTCACGGTCCATGACCTCGTGGTACTATCAGGTGCACATACCATTGGAGTAGGCCACTGCAACGGCTTCAGCAACAGACTCTACAACTTCACCGGAAAGGGAGACGCAGACCCTTCCCTCAACTCAACCTATGCTGCTTTCTTGAAGACCAAATGCCGGAGCCTCTCCGACACGACAGCGGTAGAGATGGACCCTCAAAGCTCCCGAAACTTCGATAGCAACTACTTCGCTATCCTGAAGCAAAACAAGGGTCTCTTTCAGTCTGACGCAGCTCTTCTAACCAACAAGGGTGCAAGAAAGATTGCTCTAGAGTTGCAAGACTCGGCTGATTTCTTCACGGAGTTCGCTCAGTCCATGAAGAGGATGGGAGCCATAGGAGTCCTCACAGGCAGAGCAGGGGAGATCAGGAAGAAGTGCAGCATTGTCAATGTTTGA 972 0.4805 MKANLPLLVSMVVLGVLGVCQGGSLRKKYYKSACPLAEEIVQKVTWRHVSSNPNLPAKLIRMHFHDCFVRGCDGSVLLNSTANSTAERDAAPNLSLAGFDVIDDIKSQLEKTCPGVVSCADILALASRDSVSFQFKKPMWEVLTGRRDGKVSLASEALANIPPPVFNFSSLKQSFASKGLTVHDLVVLSGAHTIGVGHCNGFSNRLYNFTGKGDADPSLNSTYAAFLKTKCRSLSDTTAVEMDPQSSRNFDSNYFAILKQNKGLFQSDAALLTNKGARKIALELQDSADFFTEFAQSMKRMGAIGVLTGRAGEIRKKCSIVNV* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0223 323 FunFam Peroxidase 162 301 - -
Vvi7g0223 323 FunFam Peroxidase 28 165 - -
Vvi7g0223 323 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g0223 323 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g0223 323 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g0223 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g0223 323 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g0223 323 ProSiteProfiles Plant heme peroxidase family profile. 24 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g0223 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Vvi7g0223 323 Gene3D Peroxidase, domain 2 162 301 - -
Vvi7g0223 323 Gene3D - 28 322 - -
Vvi7g0223 323 SUPERFAMILY Heme-dependent peroxidases 25 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi7g0223 323 CDD secretory_peroxidase 25 321 IPR033905 GO:0004601|GO:0042744
Vvi7g0223 323 PANTHER PEROXIDASE 25-RELATED 13 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g0223 323 Pfam Peroxidase 42 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g0223 323 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g0223 323 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g0223 323 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g0223 323 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g0223 323 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g0223 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g0223 323 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g0223 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g0223 323 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0223 Vvi-Chr7 2184278 2186951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0223 5 322 Peroxidase AT1G05260 56.832 5.89e-123 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0223 K00430 - vvi:100247634 629.402