Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0144 ATGCAAATTTACATGCATATGCGCAAGCAAACACAGCCTCTACTAAGTATCCCCCCCGGGGACCTCACCATGGATGTCTCCGGCCATCGGTGGCCCAAGGGGAAGGTGGTGGTGGTAATGGGGGCGACCGGCACGGGGAAGTCGCGGCTCTCCATCGACCTCGCCACCAGGTTTCCCGCAGAGATTGTGAACTCGGACAAAATGCAAGTCTACGAAGGACTAGACATCGTCACCAACAAGATCACAGAGGAGGAGCAGCGCGGCGTTCCTCACCATCTCCTCAGGATAGCGCATCCTAATGTGGATTTCACTGCATCCGATTTTCGGGACATGGCCTCACTCTCCATTGAATCAATCCTCGGTCGAGGGCGCCTCCCAATCGTCGTTGGGGGCTCCAATTCATACATTGAGGCCCTGGTTGGCGACGAATACTCCAAGTTCCGGTCCCGGTACGAGTGCTGCTTCCTCTGGGTGGACGTCTCCCGGTCGGTCCTTCACTCATTCGTCTCCAAACGGGTCGACAAGATGGTGGAGAAGGGAATGGTGGAAGAAGTTCAACAACTGTTCCATCCAAATGCAGACTACACGAGGGGGATAAGAAGAGCTATTGGGGTTCCGGAGCTCGATCTTTATTTCCGAACGGAGGGTTTCCTGGACGAAGAAGCTCGAGCTAGGGTTTTGCAGGAGGCAGTGCATGAGATCAAGGCTAACACATGCAAGCTAGCCTGTCGCCAATTGGAGAAGATTCATCGGCTCAAGAACGTCCGGAAATGGAAGATTCACAGGCTGGGCGCCACTGAAGTGCTCCGAAAGTGCGATAGAGAGGCTGATGAAGCATGGGAGAAGCTAGTGGCGAGGCCGAGCACCATGATGGTCGCGCAATTCCTCTACAGTGTGGGCGCCACCAGATCAATCGCCACCACTTCACCACCAACCATTAGAGCGGCAGCATCCATGGAAGCTGCCCTAGCAGCAACCCACTAG 984 0.5518 MQIYMHMRKQTQPLLSIPPGDLTMDVSGHRWPKGKVVVVMGATGTGKSRLSIDLATRFPAEIVNSDKMQVYEGLDIVTNKITEEEQRGVPHHLLRIAHPNVDFTASDFRDMASLSIESILGRGRLPIVVGGSNSYIEALVGDEYSKFRSRYECCFLWVDVSRSVLHSFVSKRVDKMVEKGMVEEVQQLFHPNADYTRGIRRAIGVPELDLYFRTEGFLDEEARARVLQEAVHEIKANTCKLACRQLEKIHRLKNVRKWKIHRLGATEVLRKCDREADEAWEKLVARPSTMMVAQFLYSVGATRSIATTSPPTIRAAASMEAALAATH* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0144 327 Gene3D - 33 296 IPR027417 -
Vvi7g0144 327 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 34 295 IPR039657 -
Vvi7g0144 327 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 260 - -
Vvi7g0144 327 FunFam Adenylate isopentenyltransferase 5, chloroplastic 162 260 - -
Vvi7g0144 327 Pfam IPP transferase 147 247 - -
Vvi7g0144 327 Pfam IPP transferase 69 141 - -
Vvi7g0144 327 Hamap tRNA dimethylallyltransferase [miaA]. 36 285 IPR018022 GO:0008033
Vvi7g0144 327 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 191 IPR027417 -
Vvi7g0144 327 FunFam Adenylate isopentenyltransferase 5, chloroplastic 33 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0144 Vvi-Chr7 1521963 1522946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0144 149 296 C2H2 Transcription Factor Family AT2G27760 29.714 2.48e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0144 K10760 - vvi:100245931 633.639