Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0117 ATGACGACGATTCGCAGATTCTGCTGCAACGACCTCCTCTCCTTCGCATCTGTAAATCTCGACCATCTCACTGAAACTTTCAATATGTCTTTCTACATGACCTACTTGGCTAGATGGCCTGATTATTTTCACGTTGCCGAGGGTCCCGGAAATCGAATCATGGGCTACATTATGGGGAAAGTTGAAGGGCAAGGTGAATCTTGGCATGGTCATGTAACTGCAGTAACTGTCGCTCCAGAGTATCGCAGGCAGCAATTAGCCAAAAAACTGATGAACCTGCTAGAAGATATCAGTGATAAGATAGATAAGGCTTATTTTGTGGACCTTTTTGTGAGAGCATCAAATACACCAGCAATAAAGATGTATGAAAAGCTTGGGTATGTAATCTATAGAAGGGTTCTGCGTTATTACTCTGGGGAGGAAGATGGATTAGGTGAGCATCTAAATTTGACAATACTTACTAATGTGCTAATTTGCTAA 480 0.4188 MTTIRRFCCNDLLSFASVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEKLGYVIYRRVLRYYSGEEDGLGEHLNLTILTNVLIC* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0117 159 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016747
Vvi7g0117 159 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 144 - -
Vvi7g0117 159 Gene3D - 2 152 - -
Vvi7g0117 159 CDD NAT_SF 43 97 - -
Vvi7g0117 159 FunFam N-alpha-acetyltransferase 20 2 155 - -
Vvi7g0117 159 Pfam Acetyltransferase (GNAT) family 39 127 IPR000182 GO:0016747
Vvi7g0117 159 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 140 IPR016181 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vvi7g0117 Acetyltransf_1 5.3e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0117 K17972 - vvi:100252851 300.056