Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0087 ATGAGCAACCAACTGTACAATACTCACGTGAAGCTGCTCGCATTCGATCTTCTCTCCCTCACCCAAACTCCTTCGCCTTCATCCTCGGATCCAATCTCCTTCTCTCGCAGGGGCACGCCCCTCTCACGCGCCGAAACCCTAGGTACAGTCACCAGCCGCGAGCTCAAACCCCACAAATTCCTCAAATTCACCGTCGACGACGGCACTGGCTGTGTCCCCTGTGTTCTCTGGCTCAACCACCTCTCTTCCCCCTACTTTTCTCGTCGGAATCCGGCGGATGTTAGATTAATTGCCGATTTGGCGGAGTACCAAGCGTCGGAGGTCAAGCTTGGAGTTCTTGTCAGAGTGCGCGGCCGGATCACGGCGTACAGAGGTACAGTGCAAATTACAGTTTCGAATGTGATTGTCGAGAGGGATCCGAATATGGAGATTTTGCATTGGTTGGATTGTATTAAGTTAGCGAGAAAATGTTATGATGTTATGCCTCATGGAAAATAG 498 0.512 MSNQLYNTHVKLLAFDLLSLTQTPSPSSSDPISFSRRGTPLSRAETLGTVTSRELKPHKFLKFTVDDGTGCVPCVLWLNHLSSPYFSRRNPADVRLIADLAEYQASEVKLGVLVRVRGRITAYRGTVQITVSNVIVERDPNMEILHWLDCIKLARKCYDVMPHGK* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0087 165 Pfam OB-fold nucleic acid binding domain 48 134 IPR004365 GO:0003676
Vvi7g0087 165 FunFam CST complex subunit STN1 3 161 - -
Vvi7g0087 165 Gene3D - 3 161 IPR012340 -
Vvi7g0087 165 PANTHER REPLICATION PROTEIN A-RELATED 5 159 IPR040260 -
Vvi7g0087 165 SUPERFAMILY Nucleic acid-binding proteins 34 153 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0087 18 151 Core DNA Replication Machinery Family AT3G02920 26.866 5.55e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0087 K23312 - vvi:100852748 304.293