Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0083 ATGAAAATGGATTTGAGAAGTGATGATGAGGTTTTAGTGACTGCAAAAGCTGAGAAATCCAGGACTGGAGAGGGAGAAACTGTCTCAGACAAGTCTAGTATTTCGAGTAGTGATTTGGGTTCAAAGAAGGATGGGGGGAATACTAGTAACAAGGATTTATTTCTTAGAGCAGATAAAATCGATTTCAAAAGCTGGGATATCCAGCTGGATAAGCACTTGAGTCGAGTTATTTCAAGGGATAGGGAAGTTAATACCAATACAAAGAAGGAAGACTGGGAAATTGAGTTGTCTAAATTGGATATAAGAAGTGTTATAGCTCATGGGACATATGGTACTGTGTACCGAGGCGTTTATGATGGCCAAGATGTTGCAGTGAAGCTGTTGGATTGGGGGGAGGATGGTCTTGCCACAGCTGCTGAAACTGCTGCTCTTCGGACCTCGTTTCGGCAAGAGGTTGCTGTCTGGCATAAGCTTGACCATCCAAATGTTACAAAGTTTATTGGAGCTTCGATGGGAACATCTGATCTTAGGATCCCTTCAAATAGCATTTCAAGTGATGGTCGTAATCCTGTTCCTTCCAGAGCATGTTGTGTTGTAGTCGAGTACCTTCCTGGTGGGACGCTAAAGAAATTTTTAATCAGGAATAGGAGAAAGAAACTTGCCTTTAAGATTGTAATTCAACTGGCTTTGGACCTCTCTCGAGGTTTGAGCTATCTTCACTCAAAGAAGATCGTACACCGTGATGTTAAAACAGAAAATATGTTGCTTGATGCTCATAGAACATTGAAAATTGCTGATTTTGGTGTTGCTCGAGTTGAAGCTCAAAATCCAAGAGACATGACTGGGGAAACCGGAACCCTTGGTTACATGGCCCCAGAGGTTCTTGATGGTAAACCATATAATAGGAAGTGTGACGTCTACAGTTTTGGCATATGCTTATGGGAAACGTATTGCTGTGACATGCCTTACCCTGATCTTAGCTTCGCCGATATATCATCTGCAGTTGTTCGACAGAATTTACGACCAGATATCCCTAGATGTTGCCCAAGTTCATTGGCAAGCATCATGCGGAAATGTTGGGATGGGAACCCTGACAAACGTCCTGACATGGATGAGGTGGTGAGGTTGTTAGAAGCCATTGATACGAGCAAAGGAGGCGGCATGATACCAGAAGACCAGGTTAGTAGCTGTTGCTTTTTCTCTGTGGCTCGTGGTCCCTGA 1221 0.4333 MKMDLRSDDEVLVTAKAEKSRTGEGETVSDKSSISSSDLGSKKDGGNTSNKDLFLRADKIDFKSWDIQLDKHLSRVISRDREVNTNTKKEDWEIELSKLDIRSVIAHGTYGTVYRGVYDGQDVAVKLLDWGEDGLATAAETAALRTSFRQEVAVWHKLDHPNVTKFIGASMGTSDLRIPSNSISSDGRNPVPSRACCVVVEYLPGGTLKKFLIRNRRKKLAFKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDAHRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWETYCCDMPYPDLSFADISSAVVRQNLRPDIPRCCPSSLASIMRKCWDGNPDKRPDMDEVVRLLEAIDTSKGGGMIPEDQVSSCCFFSVARGP* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0083 406 SUPERFAMILY Protein kinase-like (PK-like) 83 377 IPR011009 -
Vvi7g0083 406 PRINTS Tyrosine kinase catalytic domain signature 348 370 IPR001245 GO:0004672|GO:0006468
Vvi7g0083 406 PRINTS Tyrosine kinase catalytic domain signature 238 256 IPR001245 GO:0004672|GO:0006468
Vvi7g0083 406 PRINTS Tyrosine kinase catalytic domain signature 304 326 IPR001245 GO:0004672|GO:0006468
Vvi7g0083 406 PRINTS Tyrosine kinase catalytic domain signature 200 213 IPR001245 GO:0004672|GO:0006468
Vvi7g0083 406 Gene3D Transferase(Phosphotransferase) domain 1 203 391 - -
Vvi7g0083 406 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 50 380 - -
Vvi7g0083 406 MobiDBLite consensus disorder prediction 1 26 - -
Vvi7g0083 406 Pfam Protein tyrosine and serine/threonine kinase 101 377 IPR001245 GO:0004672|GO:0006468
Vvi7g0083 406 ProSiteProfiles Protein kinase domain profile. 99 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0083 406 SMART serkin_6 99 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0083 406 FunFam Kinase suppressor of Ras 1 88 183 - -
Vvi7g0083 406 Gene3D Phosphorylase Kinase; domain 1 87 180 - -
Vvi7g0083 406 MobiDBLite consensus disorder prediction 27 45 - -
Vvi7g0083 406 FunFam Serine/threonine-protein kinase HT1 203 388 - -
Vvi7g0083 406 CDD STKc_MAP3K-like 105 377 - -
Vvi7g0083 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Vvi7g0083 406 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0083 Vvi-Chr7 945497 949927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0083 26 406 MAP Kinase Kinase Kinase AT3G22750 73.491 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vvi7g0083 PK_Tyr_Ser-Thr 4.6e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0083 - K01968 vvi:100852865 795.423