Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0080 ATGGGAAATGGTGACTACAAGTACCCAGCGGCGGGCGTGGAGTGCGCCCACCGTGTGGCGGTTCCACCTCCGCAGCCCTTCACGAAATCGCTCAAGACGTCTCTGAAAGAGACCTTCGTCCCCGATGATCCGCTTCGGCAATTCAAGAACCAGCCTGCTTCGAGGATATTCAGACTGGGACTTCAGTACCTTTTTCCCATCCTCGAATGGGGTCCTCGCTACAGCTTCCAGTTCCTCAAGGCCGACCTTATTTCCGGCATCACCATCGCCAGCCTCGCCATCCCTCACGGGATCGCCAATCAACCTCCAATTCTCGGGCTATATTCGAGCTTCGTACCGCCGCTGGTTTATGCTATGATGGGGAGCTCCAGAGACTTGGCTGTGGGGACAGTAGCAGTTGGATCGCTTATGATGGGTTCCATGCTGGGGAATGAAGTGAAGGCCAATGAACATCCCCAGACTTATCTTCACCTCGCTTTCCTAGCCACATTCTTTGCTGGAGTTTTTCAAGCTTCGCTTGGCCTTCTGAGGCTAGGGTTTGTGGTTGATTTTCTGTCGCATGGGACGAAAGTGGGTTTCATGGGAGGGGCTGCAACAGTTGTGTGTCTGCAACAGCTGAAAGGGATTCTGGGTCTCGACCATTTCACCCATGGCACTGATATCGTCTCTGTCATGCGTTCTGTCTTCACCCAAACACACCAGTGGAGATGGGAAAGCGGAGTGATGGGGTGTTGTTTCCTTTTCTTCCTCATGCTTACAAAATACTTTAGCAAGAGGAGACCCAAGTTCTTTTGGGTATCAGCAATGGCACCACTGACGTCAGTGATACTAGGAAGTCTTCTCGTTTATCTCACCCGCGCTGATAGACACGGTGTCCAAGTGATCGGAAACTTGAAGAAAGGTCTCAATCCACCCTCCCTCAGCGAACTACCTTTTGGATCGCCATATCTTTCAACTGCCATTAAAACCGGCATCGTCACTGGCATCATTGCTGCAGCAGAAGGAATAGCAGTGGGGAGAAGCTTTGCCATGTCTAAGAACTACCATATTGATGGGAACAAAGAGATGATTGCTTTTGGGATGATGAACATTGCTGGCTCTTGCACTTCTTGCTACCTCACCACGGGGCTATTTTCGAGATCAGAAGTGAACTTCAATGCAGGGTGCAAGACAGCAGTGTCAAACATTGTGATGGCAATGGCAGTGATGATCACACTGTTGTTCCTCACACCACTGCTCCATTACACTCCCATAGTGGTGCTGTCCTCCATTAGCATAGCTGCAATGCTTGGCCTCATAGACTATGATGCAGCCATCCACCTCTGGAAGGTGGACAAATTCGACTTCATAGTCTGCATGACCGCATACATTGGCGTGGGATTTGGCAGCGTGGAGATCGGCCTAGTCCTACCTGTTGCCATATCTCTCCTCAGGATGCTTCTCTTTGTGGCCAGGCCAAGGACTTCGGTGCTTGGGAACATTCCCAACTCCAAAATATACAGAAGTGTTGATCAATACCCAGCTGCAAGCACAGTTCCAGGATTTCTCATACTTGAGATTGATGCCCCCATTTGCTTCGCCAATGCAGGCTATCTGAGAGAAAGGATATCGAGATGGATCGAAGAGGAGGAAGACAAGCTGGAGGCAGCTGGAGAATCCAGTTTACAGTATGTTATACTTGCCATGGGGGCTGTTGGTAACATTGACACAAGTGGGATTAGCATGCTTGAGGAGGTGAAGAAGAGCACGGAAAGAAGGGGGCTCAAGGTAATTCATTACTTAATTAACCTAAATCTTCAAATTCCGCTCAAGAACACAAGGCAAAACTAA 1830 0.4962 MGNGDYKYPAAGVECAHRVAVPPPQPFTKSLKTSLKETFVPDDPLRQFKNQPASRIFRLGLQYLFPILEWGPRYSFQFLKADLISGITIASLAIPHGIANQPPILGLYSSFVPPLVYAMMGSSRDLAVGTVAVGSLMMGSMLGNEVKANEHPQTYLHLAFLATFFAGVFQASLGLLRLGFVVDFLSHGTKVGFMGGAATVVCLQQLKGILGLDHFTHGTDIVSVMRSVFTQTHQWRWESGVMGCCFLFFLMLTKYFSKRRPKFFWVSAMAPLTSVILGSLLVYLTRADRHGVQVIGNLKKGLNPPSLSELPFGSPYLSTAIKTGIVTGIIAAAEGIAVGRSFAMSKNYHIDGNKEMIAFGMMNIAGSCTSCYLTTGLFSRSEVNFNAGCKTAVSNIVMAMAVMITLLFLTPLLHYTPIVVLSSISIAAMLGLIDYDAAIHLWKVDKFDFIVCMTAYIGVGFGSVEIGLVLPVAISLLRMLLFVARPRTSVLGNIPNSKIYRSVDQYPAASTVPGFLILEIDAPICFANAGYLRERISRWIEEEEDKLEAAGESSLQYVILAMGAVGNIDTSGISMLEEVKKSTERRGLKVIHYLINLNLQIPLKNTRQN* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0080 609 PANTHER SULFATE TRANSPORTER 29 592 IPR001902 GO:0016020|GO:0055085
Vvi7g0080 609 NCBIfam sulfate permease 66 594 IPR001902 GO:0016020|GO:0055085
Vvi7g0080 609 CDD STAS_SulP_like_sulfate_transporter 506 601 - -
Vvi7g0080 609 ProSitePatterns SLC26A transporters signature. 103 124 IPR018045 GO:0008271|GO:0008272
Vvi7g0080 609 Pfam STAS domain 506 591 IPR002645 -
Vvi7g0080 609 Gene3D STAS domain 485 606 IPR036513 -
Vvi7g0080 609 Pfam Sulfate permease family 79 454 IPR011547 GO:0016020
Vvi7g0080 609 SUPERFAMILY SpoIIaa-like 508 591 IPR036513 -
Vvi7g0080 609 ProSiteProfiles STAS domain profile. 505 590 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0080 Vvi-Chr7 906676 912105 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0080 17 591 Inorganic Solute Cotransporters AT4G02700 67.470 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0080 K17471 - vvi:100853917 1136.32