Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0076 ATGAGCATGGGAAACGGTGACTACAAGTACCCGGCGACGGGAGTGGAGTGTGCCCATCGTGTGGCGGTTCCACCGCCGCAACCCTTCACGAAATCGCTCAAGACGTCTCTGAAAGAGACCTTCTTCCCCGATGACCCGCTTCGGCAATTCAAGAACCAGCCTGCTTCGAGGAAATTCATACTGGGACTTCAGTACTTTTTTCCCATCCTCGAATGGGGTCCTCGCTACAGCTTCCAGTTCTTGAAGGCCGACCTGATTTCCGGCATCACCATCGCCAGCCTCGCCATCCCTCAGGGGATCAGCTACGCCAAACTCGCCAATCTACCGCCAATTCTCGGGCTATATTCGAGCTTCGTTCCGCCGCTGGTTTATGCTATGATGGGGAGCTCCAGAGACTTGGCGGTGGGGACAGTAGCGGTTGGATCGCTTCTGATAGCTTCCATGCTGGGGAATGAAGTGAAGGCCAATGAACATCCCCAGACTTATCTTCACCTCGCTTTCCTAGCCACATTCTTTGCTGGAGTTTTTCAAGTTTCGCTTGGCCTTCTGAGGCTAGGGTTTGTGGTCGATTTTCTGTCGCATGCAACCATAGTGGGGTTCATGGGAGGAGCTGCAACAGTTGTGTGTCTGCAACAGCTGAAAGGGATTCTGGGTCTCGACCATTTCACCCATGGCACCGATATCGTCTCTGTCATGCGTTCTGTCTTCACCCAAACACACCAGTGGAGATGGGAAAGTGGAGTGCTTGGATGTTGTTTCCTTTTCTTCCTCATGCTTACAAAATACTTCAGCAAGAGGAGACCCAAGTTCTTTTGGGTATCAGCAATGGCACCATTGACGTCAGTGATATTAGGAAGTCTTCTCGTTTATCTCACCCACGCTGAGAGACACGGTGTCCAAGTGATTGGAAACTTGAAGAAAGGTCTCAATCCACCCTCCCTCAGCGACCTACCTTTTGGATCCCCGTATCTTTCGACTGCCATTAAAATCGGCATCATTATTGGCATCATCGCATTGGCAGAAGGAATAGCAGTGGGGAGAAGCTTTGCCATGTTTAAGAACTACCATATTGATGGGAACAAAGAGATGATTGCTTTTGGGATGATGAACATTGCCGGTTCTTGCACTTCTTGCTATCTCACCACTGGGCCTTTTTCGAGATCAGCAGTGAACTTCAATGCAGGGTGCAAGACAGCAGTGTCAAACATTGTGATGGCAATGGCAGTGATGATCACACTGTTGTTCCTCACACCACTGTTCCATTACACTCCCCTAGTGGTGCTGTCCTCCATTATCATAGCTGCAATGCTTGGCCTCATAGACTATGATGCAGCCATCCATCTCTGGAAGGTGGACAAATTCGACTTCATAGTCTGCATAGCCGCATACATTGGCGTGGTGTTTGGCAGCGTGGAGATCGGCCTAGTCCTAGCCGTGGCCATATCTCTTCTCAGGATGGTTCTCTTTGTGGCCAGGCCAAGGACTACGGTGCTTGGGAACATCCCCAACTCCAAGATATACAGAAGTGTTGACCAATACCCAGCTGCAAGCACAGTTCCAGGAGTTCTCATACTTGAGATTGATGCCCCCATTTACTTCGCCAATGCAGGCTACTTGAGAGAAAGGATATCGAGATGGATCGATGAGGAGGAAGACAAGCTGAAGGCAGCTGGAGAATCCAGTTTACAGTATGTTATACTTGACATGGGGGCTGTTGGTAACATCGACACAAGTGGGATTAGCATGCTTGAGGAGGTGAAGAAGAGCATGGAAAGAAGCGGGCTCAAGCTTGTACTAGCGAATCCAGGAGGGGAAGTGATGAAGAAGATGAACAAGTCCAAGTTTATAGAGGTATTAGGGCAGGAGTGGATATATCTGACAGTGGGGGAGGCTGTGGGAGCATGCAACTTCATGCTTCATACATGCAAGCCAAAAGCTATGACTGATGATTCAAGCATGGTTTGA 1965 0.4952 MSMGNGDYKYPATGVECAHRVAVPPPQPFTKSLKTSLKETFFPDDPLRQFKNQPASRKFILGLQYFFPILEWGPRYSFQFLKADLISGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAMMGSSRDLAVGTVAVGSLLIASMLGNEVKANEHPQTYLHLAFLATFFAGVFQVSLGLLRLGFVVDFLSHATIVGFMGGAATVVCLQQLKGILGLDHFTHGTDIVSVMRSVFTQTHQWRWESGVLGCCFLFFLMLTKYFSKRRPKFFWVSAMAPLTSVILGSLLVYLTHAERHGVQVIGNLKKGLNPPSLSDLPFGSPYLSTAIKIGIIIGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAFGMMNIAGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMAMAVMITLLFLTPLFHYTPLVVLSSIIIAAMLGLIDYDAAIHLWKVDKFDFIVCIAAYIGVVFGSVEIGLVLAVAISLLRMVLFVARPRTTVLGNIPNSKIYRSVDQYPAASTVPGVLILEIDAPIYFANAGYLRERISRWIDEEEDKLKAAGESSLQYVILDMGAVGNIDTSGISMLEEVKKSMERSGLKLVLANPGGEVMKKMNKSKFIEVLGQEWIYLTVGEAVGACNFMLHTCKPKAMTDDSSMV* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0076 654 SUPERFAMILY SpoIIaa-like 515 635 IPR036513 -
Vvi7g0076 654 Pfam Sulfate permease family 81 461 IPR011547 GO:0016020
Vvi7g0076 654 NCBIfam sulfate permease 68 631 IPR001902 GO:0016020|GO:0055085
Vvi7g0076 654 CDD STAS_SulP_like_sulfate_transporter 513 628 - -
Vvi7g0076 654 FunFam Sulfate transporter 31 492 638 - -
Vvi7g0076 654 Pfam STAS domain 513 631 IPR002645 -
Vvi7g0076 654 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
Vvi7g0076 654 ProSiteProfiles STAS domain profile. 512 635 IPR002645 -
Vvi7g0076 654 Gene3D STAS domain 492 637 IPR036513 -
Vvi7g0076 654 PANTHER SULFATE TRANSPORTER 30 641 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0076 Vvi-Chr7 882784 888015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0076 19 646 Inorganic Solute Cotransporters AT4G02700 71.701 0.0 925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0076 K17471 - vvi:100852937 1278.46