Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0050 ATGTTTGAGTTTAGCCTCCTACTTTCTCCATTTCTCTTCATTCTTCCACTACTTTTCTTCTTCTTCTCCTTCATTCGCACAAAATCACCTTCATCTCCTTCCGCCAGTGCCCTCAAATGTTACCCAATAATTGGCTCATCTCTGGAAATCTTAGCCAATCTAAACCGACGTATCCAGTGGACATCTGATCTTATTAGAGCCTCACCCTCTGCAACTGTAGTCATCCACCGCTTTCTGGGCACACGTGTTGTCCTCACTGGCAACCCTTCCAATGTGCAACACATCCTCAAGACCCACTTCCACAACTACCATAAAGGCCAGACCTTTGCAATCAACCTCTCTGATTTTCTTGGTGGCGGCATCTTCAATGCCGACGGCGACAACTGGAAGTTCCAGAGACAGGTCTCCAGCCATGAATTCAACACAAAATCCCTGCGCAAATTCATTGAGACTGTCGTCGATGCTGAGCTCTCCGACCGCCTCATCCCTATTTTAAGCATGGCTGCCGCCAACAATTCGATTCTGGACTTTCAAGATATTCTCCAGAGATTCGCTTTCGATAACATCTGCAAAATCGCTTTCGGGTACGATCCAGCTTATCTATTGCCATCTCTCCCACAGGCAAAATTCGCAGTTGCTTTCGAGGATGCAGCTCGAATTAGCAGCGAGAGGTTCTCTTCGATTCGCCCAACTGTGTGGAGACTGAAACGGCTTATGGGAGTGGGGTCGGAGAAGCGTCTGAAGCTTGCAGTGGGTGAGGTGCGTGAGTTCGCAAAAAACATCATAAGAGAGAAGAAAGAAGAGCTGAAGCACAAATCTTCACTCGACTCCACCGACCTCTTATCACGATTCTTGAGCTCCGGCCACTCAGATGAGGACTTTGTCACTGATATAGTCATCAGCTTTATACTCGCCGGGCGGGACACCACCTCCGCTGCTCTGACATGGTTCTTCTGGTTACTCTTCAAGAACCCAGATGTGGAAGATCAGATTCTGAATGAAATCAATGAAAAGTCTGAATTGCCGGTGTTCGATGAAGTGAAGGACATGATCTACACACACGCCTCTCTCTGTGAGAGTATGCGATTCTACCCTCCTGTCCCCGCCGACAGCAAAGAGGCGGTAAGCGACGACGTGTTGCCGGACGGCACGGTGGTGAGGAAGGGCATGAGGGTGACCTATCATCCGTACGCAATGGGAAGGTTGGAGGAGCTGTGGGGGTCGGACTGGCCGGAGTTCCGACCAGAGAGGTGGCTGCAGAGAGACCCAGATACCGGAAAATGGAGCTTTGTGGCCAGGGATCCATACACCTACCCGGTGTTTCAGGCCGGACCCAGAATTTGCCTGGGAAAGGAGATGGCGTTTCTGCAGATGAAGAGGGTGGTCGCCGGAGTCCTGCGACGATTCCAGGTGGTGCCAGTGGTGGAGGACGGTGGCGAGCCGGTCTTCACCGCCGACTTAACTGCCAAAATGAAAGGTGGTTTTCCGGTTAGGATTGTGGAAAGGGCTTATAGAGAGTGA 1521 0.5082 MFEFSLLLSPFLFILPLLFFFFSFIRTKSPSSPSASALKCYPIIGSSLEILANLNRRIQWTSDLIRASPSATVVIHRFLGTRVVLTGNPSNVQHILKTHFHNYHKGQTFAINLSDFLGGGIFNADGDNWKFQRQVSSHEFNTKSLRKFIETVVDAELSDRLIPILSMAAANNSILDFQDILQRFAFDNICKIAFGYDPAYLLPSLPQAKFAVAFEDAARISSERFSSIRPTVWRLKRLMGVGSEKRLKLAVGEVREFAKNIIREKKEELKHKSSLDSTDLLSRFLSSGHSDEDFVTDIVISFILAGRDTTSAALTWFFWLLFKNPDVEDQILNEINEKSELPVFDEVKDMIYTHASLCESMRFYPPVPADSKEAVSDDVLPDGTVVRKGMRVTYHPYAMGRLEELWGSDWPEFRPERWLQRDPDTGKWSFVARDPYTYPVFQAGPRICLGKEMAFLQMKRVVAGVLRRFQVVPVVEDGGEPVFTADLTAKMKGGFPVRIVERAYRE* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0050 506 SUPERFAMILY Cytochrome P450 39 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0050 506 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0050 506 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0050 506 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0050 506 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0050 506 CDD CYP86A 72 495 - -
Vvi7g0050 506 Gene3D Cytochrome P450 21 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0050 506 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0050 506 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0050 506 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0050 506 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0050 506 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g0050 506 PANTHER CYTOCHROME P450 25 497 - -
Vvi7g0050 506 Pfam Cytochrome P450 74 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0050 Vvi-Chr7 528454 529974 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0050 3 502 Cytochrome P450 AT5G63450 47.945 3.65e-160 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0050 K20769 - vvi:100259592 961.829