Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0037 ATGGAGGAGGTTGAGAAAGCTAACAGAGCAGCTGTGGAGAGCTGCAACAAGGTTCTAGGTCTCTTGTCTCAGGCCCAAGATCAGATTCAGCGTAAAAAATTAATGGTGGAAACTGGGGAGGCTGTGGTTAGGTTTAACAGAGTTGTTTCTCTTCTCAATACTGGTTTGGGCCATGCCAGGGTGAGAAAATCCAAAAATTTTCAAACCCCTCTCCCCCACAATATCCTCTTAGACAAGCCAAATGCCAAACAAGATCACCCATCCAAGACTTTTCAGTTTCTCCACTCCAGTTCTCTTGAAAAGCCAATTCAAGAAATGGGGTCAAATGCCAAGAACACTATGGGTTTGGGAAACCCATCATTGGAATTGACCTCCAATGGTAAAAGCCCTCTGCAACTTTCTCAACTCATACCATCGTCAACAAATTACCAGTTCCTCCACCACCAGCAACAGCAGAGGCTGCAGCAGCAGATGAAGCATCAGGCCGATACCATGTATCGGCGGAGCAATAGCGGTATCAATCTCAATTTTGATAGCTCCAGTTGTACACCAACAATGTCGTCCACCCGGTCTTTTATCTCATCCCTGAGCGTGGATGGAAGTGTGGCTAACTTGGATGGAAACGCCTTCCATTTGATTGGCCCGGCTCGATCCGATCAGAACTCCTTCCAACATAAGAGGAAGTGCTCAAGGGGAGAAGAGGGTAGTGTGAAATGCGGCAGCAGCGGCAGATGCCACTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGGTCAATCAAGGTGCCGGCTATAAGTAACAAGCTTGCTGATATCCCTCCCGATGAGTACTCGTGGAGGAAGTACGGGCAGAAGCCGATAAAGGGTTCTCCTCACCCTAGGGGATACTATAAATGTAGCAGCATGAGAGGTTGCCCTGCAAGGAAGCATGTGGAGCGATGTTTGGAAGACCCTTCAATGCTTATAGTCACTTATGAAGGTGAGCATAACCACCCAAGGTTACCATCACAATCTGCAAACCAGTAA 1023 0.4741 MEEVEKANRAAVESCNKVLGLLSQAQDQIQRKKLMVETGEAVVRFNRVVSLLNTGLGHARVRKSKNFQTPLPHNILLDKPNAKQDHPSKTFQFLHSSSLEKPIQEMGSNAKNTMGLGNPSLELTSNGKSPLQLSQLIPSSTNYQFLHHQQQQRLQQQMKHQADTMYRRSNSGINLNFDSSSCTPTMSSTRSFISSLSVDGSVANLDGNAFHLIGPARSDQNSFQHKRKCSRGEEGSVKCGSSGRCHCSKKRKHRVKRSIKVPAISNKLADIPPDEYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHPRLPSQSANQ* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0037 340 SMART WRKY_cls 272 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi7g0037 340 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 339 IPR044810 GO:0003700
Vvi7g0037 340 Gene3D WRKY domain 258 333 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi7g0037 340 Pfam WRKY DNA -binding domain 274 331 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi7g0037 340 SUPERFAMILY WRKY DNA-binding domain 270 332 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi7g0037 340 ProSiteProfiles WRKY domain profile. 267 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi7g0037 340 FunFam WRKY transcription factor 65 256 333 - -
Vvi7g0037 340 Pfam Plant zinc cluster domain 226 270 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0037 Vvi-Chr7 381615 383446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0037 1 337 WRKY Transcription Factor Family AT2G30590 53.525 5.67e-127 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vvi7g0037 WRKY 1.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0037 - - vvi:100257874 672.159