Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0026 ATGGTGGGTGCATCGAGCTCATGGTCTCGCGCATTGGTTCAGATCTCACCCTACACCTTCTTCGCCATCGGTATCGCCATTGCCATCGGCGTTTTCGTCTTAGGTGCCGCTTGGGGAATTTATATAACTGGAAGTAGTCTAATTGGTGTTTCCATCAAAGCTCCTCGGATTACTTCAAAAAATCTAATTAGGCCGAATGCTATTGATGATCTACAAAAACAATATTGA 228 0.443 MVGASSSWSRALVQISPYTFFAIGIAIAIGVFVLGAAWGIYITGSSLIGVSIKAPRITSKNLIRPNAIDDLQKQY* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0026 75 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 5 63 - -
Vvi7g0026 75 Gene3D - 18 66 IPR035921 -
Vvi7g0026 75 SUPERFAMILY F1F0 ATP synthase subunit C 16 63 IPR035921 -
Vvi7g0026 75 Pfam ATP synthase subunit C 23 63 IPR002379 GO:0015078|GO:0033177|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0026 Vvi-Chr7 290282 292979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0026 2 63 Primary Pumps ATPases(2) AT4G32530 80.645 2.94e-27 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0026 K03661 - vvi:100253217 103.219