LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi7g0009	ATGGAGTCTGTGTTTTCGTCGGACGATCTGGAAGCGATGTGGACGGCGGTGACTGCGGGGACGTCGGCGGGAATGAGTAGGATATCATCGGAGTGGATGTTGGAGAAGTTTCTTCTAGAAGCTTCTTCTTCTTCTCCTGCTTCTTCTACTTCTTGCCCGGTATCTGCGGTGTCTCAGTGTCCGGCCCCCTATGCTGACGTCACAGCGCCTTATGCCGCCGCCGCCGCCGCCGCTCAATCATCGTCGTCGAAGTCGAGGCCGCGAGGTGAAGACGATGAAGTCGTGGAGATCAAGGTTCGTTCTCCGCCGTCGGATCAGCCTCCGGAGAATCCCGTTGATCATCAGGCGTTTCTCAGAAAACGTCTCGATCTGGCGTGCGCTGCTGTTGCTCTCTCTCGGGAATCTGGCGTAAAGCCTCAGGAATCTGCCGTAAAGCCTCAGGAATCTGCTGTAAAGCCTCAGGAATCTGCACTTTCAATGCAAACTCAATCAAAGCCTTCTCAACTGGGGTCTCAAGCTGTTGCCACTGTGGACCCTGGACATGTATTCCCCATCACACAAGATAAGGTTGAAGGTGGGTCACTTGGCATTCCAGCCTCAGCTACCTCTCAGAATAAATCAGGGGCACAGGTTATAACAACAACCAGTGGATCATCAAGAGAACTATCTGATGATGATGAGCTTGAAGGAGAAACTGACACCACTGGTAATATGGATCCTGCTGATGAAAAGCGTGCTAGGAGGATGCTATCTAATCGAGAGTCAGCTAGACGCTCCAGAAGAAGAAAGCAAGAACATTTGAGTGAACTTGAAACACAGGTTTCACAATTAGGGGTTGAAAACTCTTCATTATTGAAGCGTCTCACAGACATTAATCAAAAGTACAATGAAGCTGCTGTTGACAACAGAGTTTTAAAAGCTGATGTTGAGACATTGAGAACAAAGGTGAGGATGGCTGAGGATGCAGTTAAGCGAGTCACAGGGTTGACCTCTCTGCTTCCTGCTATACCGGATATCCCGAGCATGGGCATGCCATTTGTGAACAACACATCTTCCAACACATCTGCAGATGCTGCTGTGCCTGTCCAACGCGACTCCAACCACTTCATCCACCCACCGGTTCCTAACAATCTGATTGCTCCTCCACATGACCAGAGGTTGAACAATGGCTTCCCTACCAATTGCCCTCCCCTCCCCACTGAAAGCCTACTGAATGGCGCTGGGCCAAAGAACATGCCTCAAACATCGCCAATGCAGAACGTTTCAAGAGTTTGTGTGGGTGCTAATCCATGTGGCGTGATGCCTGGTTGGGACTCGGTGCCTTCCCATGTAACTACAAACATTAAAAACCAGAACTAA	1359	0.5004	MESVFSSDDLEAMWTAVTAGTSAGMSRISSEWMLEKFLLEASSSSPASSTSCPVSAVSQCPAPYADVTAPYAAAAAAAQSSSSKSRPRGEDDEVVEIKVRSPPSDQPPENPVDHQAFLRKRLDLACAAVALSRESGVKPQESAVKPQESAVKPQESALSMQTQSKPSQLGSQAVATVDPGHVFPITQDKVEGGSLGIPASATSQNKSGAQVITTTSGSSRELSDDDELEGETDTTGNMDPADEKRARRMLSNRESARRSRRRKQEHLSELETQVSQLGVENSSLLKRLTDINQKYNEAAVDNRVLKADVETLRTKVRMAEDAVKRVTGLTSLLPAIPDIPSMGMPFVNNTSSNTSADAAVPVQRDSNHFIHPPVPNNLIAPPHDQRLNNGFPTNCPPLPTESLLNGAGPKNMPQTSPMQNVSRVCVGANPCGVMPGWDSVPSHVTTNIKNQN*	453

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi7g0009	452	MobiDBLite	consensus disorder prediction	147	174	-	-
	Vvi7g0009	452	Coils	Coil	302	322	-	-
	Vvi7g0009	452	PANTHER	BASIC LEUCINE ZIPPER 63	1	423	-	-
	Vvi7g0009	452	Pfam	Basic leucine-zipper C terminal	311	422	IPR020983	-
	Vvi7g0009	452	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	242	297	IPR004827	GO:0003700\|GO:0006355
	Vvi7g0009	452	SMART	brlzneu	240	304	IPR004827	GO:0003700\|GO:0006355
	Vvi7g0009	452	MobiDBLite	consensus disorder prediction	85	99	-	-
	Vvi7g0009	452	MobiDBLite	consensus disorder prediction	237	253	-	-
	Vvi7g0009	452	SUPERFAMILY	Leucine zipper domain	244	294	IPR046347	GO:0003700\|GO:0006355
	Vvi7g0009	452	CDD	bZIP_plant_GBF1	245	296	IPR045314	GO:0003700\|GO:0006355
	Vvi7g0009	452	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	247	262	IPR004827	GO:0003700\|GO:0006355
	Vvi7g0009	452	MobiDBLite	consensus disorder prediction	197	219	-	-
	Vvi7g0009	452	Gene3D	-	242	299	-	-
	Vvi7g0009	452	MobiDBLite	consensus disorder prediction	75	111	-	-
	Vvi7g0009	452	FunFam	BZIP transcription factor	242	293	-	-
	Vvi7g0009	452	Pfam	bZIP transcription factor	244	296	IPR004827	GO:0003700\|GO:0006355
	Vvi7g0009	452	Coils	Coil	253	273	-	-
	Vvi7g0009	452	MobiDBLite	consensus disorder prediction	194	269	-	-
	Vvi7g0009	452	MobiDBLite	consensus disorder prediction	134	174	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi7g0009	Vvi-Chr7	116894	126766	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi7g0009	1	390	bZIP Transcription Factor Family	AT4G02640	35.831	3.39e-41	149

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Vvi7g0009		bZIP_C	1.2e-26	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi7g0009	K25784		-	vvi:100261345	805.823