Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1379 ATGATGGTTTCCTTAGTCTTCAATCTTCTCTTCTTGTTTAGTTTTGCTTTCTTGCAGGGAGCCATTGCTGATAGAAAGCATTACATTGTTTATATGGGGGATCACTCATACCCGGATTCGGAATCTGTGGTTGCAGCTAACCATGAGATGCTAGCTTCAGTTATTGGAAGTGTTGATAGGGAACAGGCAGTGGCACTTCACCATTACAGTAAAAGCTTTAGAGGGTTCTCAGCCATGCTTACACCAGAGCAAGCTCAAAAACTTGCAGAGAGCGATTCAGTAATTTCAGTGTTCAGGAGCAGGATGAACCGAGTCCATACAACTCATTCTTGGGATTTTCTGGGAATAGACTCTATTCCTCGGTATAACCAACTGCCAATGGACTCAAACTCTAACGTTATTATTGGTGTCATTGACACAGGAGTTTGGCCAGAGTCAGAGAGCTTCAATGATGAAGGATTAGGCCATGTACCAAAGAAATTCAAGGGAGAATGTGTCAATGGTGAAAATTTTACATCAGCCAACTGCAACAGGAAAATCGTAGGTGCTCGATTCTACCTGAAAGGTTTTGAAGCTGAGAATGGCCCCCTTGAATCCATTGGCGGTGTTTTCTTCCGATCACCACGAGACAGCGATGGCCATGGCACCCACACAGCCTCGACGATTGCAGGATCAGAGGTAGCTAATGCCAGCTTATTTGGGATGGCCAGAGGCACTGCAAGAGGCGGTGCACCAGGTGCTAGACTTGCCATCTACAAGGCTTGTTGGTTTAACCTCTGCAGTGATGCTGACATTCTTTCTGCTGTGGATGATGCCATTCATGATGGTGTTGATATTCTCTCACTTTCCCTTGGCCCTGACCCTCCCCAGCCTATTTACTTCGAAGATGCAGTCTCTGTTGGATCTTTCCATGCATTCCAACATGGAATTCTTGTTTCTGCTTCAGCAGGAAACTCTGCTTTCCCAAAAACTGCCTGCAATGTTGCTCCTTGGATCTTGACTGTTGCTGCAAGCACTATAGACAGAGATTTCAACACATACATACATCTTGGAAATTCAAAAATATTAAAGGGTTTCTCCTTAAACCCTCTTGAGATGAAAACCTTTTATGGTTTAATAGCTGGGAGTGCAGCCGCTGCCCCTGGAGTTCCTTCAAAGAATGCCAGTTTTTGCAAGAACAGTACTCTAGATCCAACGTTGATAAAAGGAAAGATTGTGGTGTGCATGATCGAGGTAATAAATGAAAGCCGGAGAGAGAAAAGTGAGTTTGTGAAGCAAGGTGGTGGTGTGGGGATGATACTAATTGATCAATTTGCCAAAGGTGTTGGTTTTCAATTTGCAATCCCAGGTGCCCTCATGGTTCCAGAAGAGGCAAAAGAGCTTCAAGCATACATGGCAACAGCAAAGAATCCTGTTGCTACAATCTCCACAACAATAACTCTTCTAAATATTAAACCTGCACCAAGGATGGCTGTATTTTCTTCCATGGGTCCAAACATTATAAGTCCAGAGATTCTTAAACCGGATATAACAGGACCTGGAGTGAATATTCTGGCAGCATGGTCTCCGGTAGCAACTGCAAGCACTGGGGATCGGTCAGTAGACTATAACATAATCTCCGGAACGTCCATGTCTTGCCCACACATATCAGCAGTGGCTGCAATTTTGAAATCCTACAACCCTTCTTGGAGCTCAGCTGCAATAAAATCTGCAATGATGACAACAGCTACTGTCCTAGATAACATGCAAAGCACCATCAGAAAAGATCCAGATGGCACCCCGACCACGCCTTTTGACTATGGATCTGGACACATAAACCTTGTTGCTGCATTGAATCCTGGACTAATATATGATTTTGGTTTCAATGAAGTTATCAATTTTCTCTGCAGTACTGGTGCAAGCCCTGCACAACTCAAAAACCTCACAGAGAAGCATGTTTACTGCAAGAACCCTCCACCCTCTTACAACTTCAATTACCCTTCATTTGGTGTTTCCAACTTGAATGGAAGTTTATCTGTGCACCGAGTGGTTACCTATTGTGGTCATGGCCCCACAGTCTACTATGCATATGTAGATTACCCAGCAGGTGTTAAAGTTACAGTAACACCTAACAAGCTAAAATTTACAAAGGCTGGAGAGAAGATGTCTTTTAGGGTGGATCTCATGCCTTTCAAGAATAGTAATGGAAGCTTTGTTTTTGGGGCTTTGACATGGAGCAATGGCATCCATAAGGTCAGAAGTCCTATCGGTCTCAATGTCCTCTCTACGTAG 2271 0.4386 MMVSLVFNLLFLFSFAFLQGAIADRKHYIVYMGDHSYPDSESVVAANHEMLASVIGSVDREQAVALHHYSKSFRGFSAMLTPEQAQKLAESDSVISVFRSRMNRVHTTHSWDFLGIDSIPRYNQLPMDSNSNVIIGVIDTGVWPESESFNDEGLGHVPKKFKGECVNGENFTSANCNRKIVGARFYLKGFEAENGPLESIGGVFFRSPRDSDGHGTHTASTIAGSEVANASLFGMARGTARGGAPGARLAIYKACWFNLCSDADILSAVDDAIHDGVDILSLSLGPDPPQPIYFEDAVSVGSFHAFQHGILVSASAGNSAFPKTACNVAPWILTVAASTIDRDFNTYIHLGNSKILKGFSLNPLEMKTFYGLIAGSAAAAPGVPSKNASFCKNSTLDPTLIKGKIVVCMIEVINESRREKSEFVKQGGGVGMILIDQFAKGVGFQFAIPGALMVPEEAKELQAYMATAKNPVATISTTITLLNIKPAPRMAVFSSMGPNIISPEILKPDITGPGVNILAAWSPVATASTGDRSVDYNIISGTSMSCPHISAVAAILKSYNPSWSSAAIKSAMMTTATVLDNMQSTIRKDPDGTPTTPFDYGSGHINLVAALNPGLIYDFGFNEVINFLCSTGASPAQLKNLTEKHVYCKNPPPSYNFNYPSFGVSNLNGSLSVHRVVTYCGHGPTVYYAYVDYPAGVKVTVTPNKLKFTKAGEKMSFRVDLMPFKNSNGSFVFGALTWSNGIHKVRSPIGLNVLST* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1379 756 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 749 IPR045051 -
Vvi6g1379 756 Pfam Peptidase inhibitor I9 27 104 IPR010259 -
Vvi6g1379 756 CDD Peptidases_S8_3 105 577 IPR034197 -
Vvi6g1379 756 SUPERFAMILY Subtilisin-like 105 615 IPR036852 GO:0004252|GO:0006508
Vvi6g1379 756 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 106 IPR037045 -
Vvi6g1379 756 Gene3D - 341 482 - -
Vvi6g1379 756 Pfam Fibronectin type-III domain 656 749 IPR041469 -
Vvi6g1379 756 Gene3D Peptidase S8/S53 domain 132 622 IPR036852 GO:0004252|GO:0006508
Vvi6g1379 756 ProSiteProfiles Serine proteases, subtilase domain profile. 110 611 - -
Vvi6g1379 756 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Vvi6g1379 756 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Vvi6g1379 756 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Vvi6g1379 756 CDD PA_subtilisin_like 347 475 - -
Vvi6g1379 756 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Vvi6g1379 756 FunFam Subtilisin-like protease SBT1.5 132 354 - -
Vvi6g1379 756 Pfam Subtilase family 131 584 IPR000209 GO:0006508|GO:0008236
Vvi6g1379 756 Gene3D - 628 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1379 Vvi-Chr6 19892167 19895870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1379 21 749 Subtilisin-like Serine Gene Family AT2G04160 43.215 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1379 - - vvi:100251004 1470.29