Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1373 ATGGAGTTTGATAATCTCTCAGATTGGTACACTCATCTTCTGAGGAAGTCTCCCAGCAGGACCATTCATGTTCACGTGCTCGGCAACATCATCACTGCAAATCCTGAAAACGTTGAGTACATGCTCAAGACCAGGTTTGACAATTACCCGAAAGGGAAGCCTTTCTCGGCCATCTTGGGTGATCTGTTGGGCAGAGGTATTTTCAATGTTGACGGTGACTCCTGGAAGTTTCAGAGGAAAATGGCGAGTCTGGAGCTCGGGAGTGTTTCTATAAGGACATTTGCATTCGAGATCGTTACGTCAGAGATCAAGAATAGGCTGATTCCTCTGATGTCATCGATTGCCGGTAGAAGCGAAGCCATTCTGGATCTACAGGATGTGCTTCGGCGGTTCTCGTTCGACAACATTTGCCGGTTCTCCTTCGGGTTAGACCCCGGTTGCCTCCAATTATCTTTGCCCATGTCGGAATTCGCTGAGGCCTTTGATCTTGCATCCAAGTTATCAGCTGAGCGAGCAATGACGGCATCGCCTTTGATCTGGAAGATGAAGCGGCTGCTGAATATAGGATCAGAGAGGAAGCTCAAGGAAGCCATTAAAATGGTGGATGAGCTAGCACATGAGTTGATAAAGCAAAGGCGCACAGCAGGCTTCTCAACCCAGAGAGACCTTCTCTCGAGGTTCATGTGTTCAGTCTCCGACGACCAGTACCTTCGAGACATCGTCATTAGCTTCCTTCTAGCCGGCCGCGATACGGTAGCATCCGCTCTCACCAGCTTCTTCTGGTTGCTGTCACAGCATCCGGAAGTGGTGTCTGCAATTCGGGAAGAATCGGATCGAATCATGGGGCAAACTGAAGAACAAGCAAGCTTCGAACAAATGCGGGAGATGCACTACTTGCAAGCGTCGGTATATGAGAGCATGAGGCTCTTTCCACCCATTCAATTCGACTCAAAGTTCTCACTGCAAGAAGATGTTCTACCCGATGGAACATTTGTCCGGAAAGGTACAAGGGTCACTTTTCATCCCTATGCAATGGGGCGTATGGAGAAAGCATGGGGCCCAGACTGCCTCGAATTCAAGCCAGAGAGGTGGTTAAAGAACGGAGAGTTCATGGCTGAGAACCCTTTCAAGTACCCAGTATTTCAAGCTGGGCCCAGAGTTTGTCTGGGCAAGGAAATGGCAGTGGTGCAGATGAAAAGCGTTGCTTTAGCACTAGTCCGGCGCTTCGATATCCAGGATGCAGTGCCAAGCCGGGCTCAGCGCTTTGCTCCCGGCCTCACAGCCACCGTGAGAGGTGGTTTCCAAGTCAGAGTTCATGAGAGAAGGCAGCACCAATAG 1338 0.5007 MEFDNLSDWYTHLLRKSPSRTIHVHVLGNIITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGRGIFNVDGDSWKFQRKMASLELGSVSIRTFAFEIVTSEIKNRLIPLMSSIAGRSEAILDLQDVLRRFSFDNICRFSFGLDPGCLQLSLPMSEFAEAFDLASKLSAERAMTASPLIWKMKRLLNIGSERKLKEAIKMVDELAHELIKQRRTAGFSTQRDLLSRFMCSVSDDQYLRDIVISFLLAGRDTVASALTSFFWLLSQHPEVVSAIREESDRIMGQTEEQASFEQMREMHYLQASVYESMRLFPPIQFDSKFSLQEDVLPDGTFVRKGTRVTFHPYAMGRMEKAWGPDCLEFKPERWLKNGEFMAENPFKYPVFQAGPRVCLGKEMAVVQMKSVALALVRRFDIQDAVPSRAQRFAPGLTATVRGGFQVRVHERRQHQ* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1373 445 PRINTS P450 superfamily signature 247 264 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1373 445 PRINTS P450 superfamily signature 379 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1373 445 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1373 445 PRINTS P450 superfamily signature 301 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1373 445 PANTHER CYTOCHROME P450 2 436 - -
Vvi6g1373 445 Pfam Cytochrome P450 30 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1373 445 PRINTS E-class P450 group I signature 236 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1373 445 PRINTS E-class P450 group I signature 378 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1373 445 PRINTS E-class P450 group I signature 388 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1373 445 PRINTS E-class P450 group I signature 256 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1373 445 Gene3D Cytochrome P450 3 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1373 445 CDD CYP86A 20 434 - -
Vvi6g1373 445 SUPERFAMILY Cytochrome P450 5 441 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1373 Vvi-Chr6 19789615 19790952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1373 2 441 Cytochrome P450 AT2G27690 65.101 0.0 608