Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1372 ATGGTAGCTGGGAACGATGGCATGATGTCTACCGTGGATAATGTAGCTCCTTGGACGATGACTGTTGGTGCCTTTGGCATGGATAGACAATTTAGAACCCCAGTTGCTCTCGGAAACGGTGTCAATATGTTTGGTATTTCTCCTAACACATTCAAACTAGAAAAGATGTATCCTCTGATGCCAACTACTCAACTGAAAGTCCCGGACCCGGCACCTGCTTTGGGCTATGTCACTGGTCAAATAAACCCAACAGCAGCAGTGGACCCTGGTCTCGTCTACATCACCCAAACTGATTATATCCGCTTCTTGTGCCACGAAGGCCACAGTGGGACAATACTACAACTTGTCACTGATGAGGTCATCGAAAATTGCTCCACCGTCGGTCAATTTAGAGCCCATGATGTTCTAAACTACCCCTCCATGTATGTGCAGCTTGAGGACCCTAATGCTACTATTTCCGCCACCTTCTATCGTATGGTTACCAATGTGGGGCCTTCTGACTCCGTCTACAGGGCTACTGTGAAAGCCAACGAGGGTCTGAACGTCAGTGTGTCCCCTTCGATCTTGCGCTTTCAACGACCATATCAGAGAAAATCTTTTCAGGTTACGATAACAGGGAAACCACTAGGAGAATCTGGTGCCATTCGATCAGCATCGCTGGAATGGGTAGACTCAGAATCTGTGCATAGGGTAAAATAG 699 0.475 MVAGNDGMMSTVDNVAPWTMTVGAFGMDRQFRTPVALGNGVNMFGISPNTFKLEKMYPLMPTTQLKVPDPAPALGYVTGQINPTAAVDPGLVYITQTDYIRFLCHEGHSGTILQLVTDEVIENCSTVGQFRAHDVLNYPSMYVQLEDPNATISATFYRMVTNVGPSDSVYRATVKANEGLNVSVSPSILRFQRPYQRKSFQVTITGKPLGESGAIRSASLEWVDSESVHRVK* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1372 232 Gene3D Peptidase S8/S53 domain 3 27 IPR036852 GO:0004252|GO:0006508
Vvi6g1372 232 Gene3D - 103 232 - -
Vvi6g1372 232 Gene3D - 28 66 - -
Vvi6g1372 232 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 71 230 IPR045051 -
Vvi6g1372 232 Pfam Fibronectin type-III domain 136 231 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1372 Vvi-Chr6 19778956 19781980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1372 3 60 Subtilisin-like Serine Gene Family AT5G59130 40.000 7.34e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1372 - - twl:120003126 174.096