Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1304 ATGCCACTCGCTCCATCCTCTTCTCCGCATCTTCTTCAATTCCCTGTCTCCTCACCTGCTCACCGCCTCCTCCTCTTCTCTGACCTCACCTGCGCCACATTCTTTCGCTCCTCATGGCCACCGCCATTTCCGATCTCCTTGAAGAAGGCCAATTCCTTCGTGTTTCCGATCTCCGTCCGGAGGGAGAAATGCTTCTCCAAATCAACCGAGGAGGATCTCCTGAGCGATTCGGAAACCCAAACAGGCGGAAACGACGACCGCCCGGCCTCTGTGGCTACCACTGGTGGTTCGCAGAGGATCGCGGCGTCGTCCACTGATTCTCTCTCTCTTGGAATTCGTGAGCCGGTCTATGAGGTGGTAGAGGTGAAGTCGGATGGGAAGGTGTCGACTAGGAAAATCAACCGAAGACAGTTGTTGAAGTCAAGCGGACTTCGTCCTAGAGATATACGGAGCGTGGATCCATCACTGTGGTTGACAAACTCAATGCCTTCTTTGGTGGTCCGCGAGCATGCTATACTATTAAATTTGGGATCATTGCGAGCAATAGCAATGCAAGAGAGTGTCTTTATATTTGACTATAATCGTAAAGGAGGGAAAGCTTTCATGGATTCGTTGTTGCCTCGCTTGAACCCTAAAAACATGAACGGTGGACCATCAATGCCATTTGAGCTTGAGGTCGTTGAAGCAGCCTTGCTTTCAAGGATACAGCGTTTGGAGCAGAAACTGATGGATCTAGAACCTCGTGTCCAAGCTCTGCTTGAGGTTTTACCAAACCGATTAACTGCTGACATATTGGAGCAACTTCGCCTTAGCAAGCAAACTTTGGTTGAATTAGGTTCAAGGGCTGGAGCTCTCAAACAAATGTTGCTTGATCTTCTAGAGGACCCCCATGAAATACGCCGTATGTGTATCATGGGAAAAAACTGCACACTTGTGAAAGGGAATGAAAACATGGAATGCTCTGTTCCTCTAGAAAAACAGATTGCTGAAGAAGAGGAGGAAGAAATTGAAATGCTTTTGGAAAACTATCTTCAAAGATGTGAATCTTGTCATGGTCAGGCTGAAAGGCTTCTTGATTCTGCCAGAGAAATGGAAGATTCAATTGCTGTTAATTTAAGCTCTCGGAGGCTTGAGGTAAGCAGAGTGGAATTGCTTCTTCAGGTAGGGACATTTTGTATAGCAGTTGGCGCACTGGTTGCAGGAATATTTGGCATGAACTTGAAGTCCTATCTAGAAGAACATGCGTTTGCCTTTTGGCTAACAACAGCTGGGATAATTGTTGGTGCTGTTGTGGCATTTTTTCTTATGTACTCGTATCTTAGGGCAAGGAAGATATTATAA 1341 0.4653 MPLAPSSSPHLLQFPVSSPAHRLLLFSDLTCATFFRSSWPPPFPISLKKANSFVFPISVRREKCFSKSTEEDLLSDSETQTGGNDDRPASVATTGGSQRIAASSTDSLSLGIREPVYEVVEVKSDGKVSTRKINRRQLLKSSGLRPRDIRSVDPSLWLTNSMPSLVVREHAILLNLGSLRAIAMQESVFIFDYNRKGGKAFMDSLLPRLNPKNMNGGPSMPFELEVVEAALLSRIQRLEQKLMDLEPRVQALLEVLPNRLTADILEQLRLSKQTLVELGSRAGALKQMLLDLLEDPHEIRRMCIMGKNCTLVKGNENMECSVPLEKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVNLSSRRLEVSRVELLLQVGTFCIAVGALVAGIFGMNLKSYLEEHAFAFWLTTAGIIVGAVVAFFLMYSYLRARKIL* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1304 446 CDD Mrs2_Mfm1p-like 119 445 IPR039204 -
Vvi6g1304 446 Gene3D Magnesium transport protein CorA, transmembrane region 194 377 - -
Vvi6g1304 446 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 99 446 IPR039204 -
Vvi6g1304 446 Coils Coil 326 346 - -
Vvi6g1304 446 Pfam CorA-like Mg2+ transporter protein 328 435 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vvi6g1304 446 Gene3D - 112 193 - -
Vvi6g1304 446 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 382 437 IPR045863 -
Vvi6g1304 446 MobiDBLite consensus disorder prediction 70 102 - -
Vvi6g1304 446 FunFam Magnesium transporter MRS2-11, chloroplastic 112 193 - -
Vvi6g1304 446 FunFam Magnesium transporter MRS2-11, chloroplastic 195 377 - -
Vvi6g1304 446 MobiDBLite consensus disorder prediction 75 102 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1304 110 446 MRS2 Gene Family AT5G22830 83.976 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1304 K16075 - vvi:100246455 786.949