Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1283 ATGCAGAAGGTCGAGACCTTTTACTCGACATGGTGCACAGGGGAGCTGGAGTTTGGAGGCATGTATTGTGCCATTTTAACAGTAGGCTGCCAGGTTGTATCAGCAGCAACCTTTCGAGTTCTGGGAAAGGAAGTTGCAGAACTGCCTTTGGTGGCAACGCGTAGTGATTGCCAAGGCCAGGGTTACTTCCAGGCCTTGTACACATGCATTGAAAGACTACTTTGCTTTCTCCAGGTGAATAGTCTTGTGCTTCCTGCCGCTGAAGGAGCTGAGTCCTTATGGATTAACAAGTTCAAGTTCCATAAAATGGAACAGGAGGAGCTGAACCATCTCTGCAGAGATTTCCAGATGATGACCTTCCAAGGGACATCGATGCTGCAGAAGCCGGTCCCTGAATATCGTCGGATAAGCCAAGAAAAGCTGAAGATTGTTATGAATTTAATTTTTTTTTAA 453 0.4614 MQKVETFYSTWCTGELEFGGMYCAILTVGCQVVSAATFRVLGKEVAELPLVATRSDCQGQGYFQALYTCIERLLCFLQVNSLVLPAAEGAESLWINKFKFHKMEQEELNHLCRDFQMMTFQGTSMLQKPVPEYRRISQEKLKIVMNLIFF* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1283 150 Gene3D - 16 129 - -
Vvi6g1283 150 PANTHER AUTOIMMUNE REGULATOR 14 130 - -
Vvi6g1283 150 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Vvi6g1283 150 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 16 107 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1283 Vvi-Chr6 18341077 18344322 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1283 17 133 PHD Transcription Factor Family AT3G53680 55.556 2.01e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1283 - - vvi:100255152 268.085