Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1282 ATGGGTCAGATCCAGTACTCTGAGAAGTACTTTGATGACACCTACGAGTACAGGCATGTGGTTCTTCCTCCTGAAGTGGCCAAACTGCTCCAGAAGAATCGGCTTCTCTCGGAAAATGAATGGCGTGCTATTGGGGTTCAGCAGAGCCGTGGGTGGGTCCACTATGCAATTCATCGCCCTGAGCCACACATCATGCTCTTCAGGAGGCCTCTGAACTATCAGCAGCAGCAGGAGAATCAAGCTCAGCAGGGCTTGCTTGCTAAGTGA 267 0.5169 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLQKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQGLLAK* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1282 88 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Vvi6g1282 88 Gene3D - 1 83 IPR036858 GO:0016538
Vvi6g1282 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Vvi6g1282 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Vvi6g1282 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Vvi6g1282 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Vvi6g1282 88 FunFam Cyclin-dependent kinases regulatory subunit 1 84 - -
Vvi6g1282 88 SUPERFAMILY Cell cycle regulatory proteins 1 82 IPR036858 GO:0016538
Vvi6g1282 88 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Vvi6g1282 88 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 3 83 - -
Vvi6g1282 88 SMART CKS_2 3 72 IPR000789 GO:0016538
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1282 1 82 Core Cell Cycle Gene Families AT2G27970 90.244 1.71e-51 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1282 K02219 - vvi:100261930 179.489