Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1262 ATGGCTACTGTGGCACCAACAAGCTGTGCCAGTGGGGGTGGCATAGAGGGCTGCAGCAGGGCATCCCGTTTTGCAGTTCATGTGATTAAAGGGCGGTGGTTCAGCGTTTGTGCCTCGTTCCTGGTCATGATTGGACCTGGTTCAACTTATCTTTTCGGAATCTACTCCCAAGAAATAAAGTCTGCTCTTGGTTACGATCAAACAACGTTAAATCTCCTAGGCTTCTTCAAAGATATGGGAACAAACATTGGTGTCCCTGCTGGCCTTGTTGCTGAGGTAACACCCACATGGTTCGTGCTTTTGCTCGGATCTGCCTTGAATTTATGGGGCTACCTGATGATTTGGCTGGCCGTCACCGCCAGAATTGCCAGGCCAAAAGTGTGGCACATGTGTGTGTACAATTTCGTTGGATCCAATTCTCAGAACTTTGCAAACACTGGAGCTCTTGTCACCTGTGTCAAGAACTTCCCGGAGAGTCGCGGCATCATGATAGGCCTATTGAAGGGGTTTGTGGGGCTTGGGGGAGCCATCATGACTCAATTTTACTTTGCCATCTATGGTGATGACTCTAAAGCACTCATACTCATGGTTGGATGGTTTCCAGCTGCCTTGTGCGTGATATTCGTGTACACTATTCGAACTATGAAGGTGGTTAGGCAACCCAATGAGGTTAAAATGTTTTATCAGTTCCTCTATGTATCCATTGTGCTGGCTTTGTTTCTCATGGTAATGACTATAGTTCAGAAACAAATTGTTTTCCCCCGAGCGGCTTATGCTGGAAGTGTCACGGTGGTTTGTGTTCTTCTCTTTCTCCCTTTTGTTATTGCCATTAGAGAGGAGTTAACCTTCTGGAACCTCGAGAGACAGCATGACAATTCTCCCACTGAGGTAACCGTTGAGAAACCGCAGGAAGAGGAATCAAAACCAGTGGCATTGCCTCCAGTTTCATCCACACAGGAGGAGGAAAAGCCCAATTCATCATCATTTTTTGCAAATGTTTTCAAGAAACCACCTAGAGGAGAAGATTACACAATCTTACAAGCACTCCTAAGCATTGACATGTTGACTCTATTTCTTGCAACAATGTGCGGACTGGGTTCAAGCTTGACGGCCATAGACAACTTGGGTCAAATTGGTGGGGCACTGGGCTACCCAACTCGAACCATAAGCTCTTTTGTGTCACTAGTAAGCATATGGAATTACTTCGGGAGAGTCTTCTCCGGGTTCGTATCAGAGATCCTAATAGCAAAATGGAAAGTTCCTCGGCCCCTTATGCTCACTCTAACCCTTGTCTTGTTATGCGTTGGCCACCTAATGATTGCCTTCCCTGCCCCTGGCTCGATCTATGTGGCATCAGTGTTCATAGGATTCGCGTACGGCGCACAATTGACACTGATTTTCGCCATCATTTCCGAGCTCTTTGGTCTAAAGTACTATGCCACGTTGTTCAATTGTGGACAACTGGCGACCCCCATTGGGACATATGTACTAAATGTGAAGGTCACTGGAATGTTTTACGATCAGGAGGCTCTAAAGGAGCTCGCAAAGAAGGGTATGACTAGATCATCAGTGAAGGAACTAATTTGCATTGGAGTTCAGTGTTACAAGAAATCCTTTATAATCTTGGCTGCTGGCACCCTATTTGGAGCCGCCGTTTCAATGATTTTGGTTATCAGAACCCAAGAGTTTTACAGAGGCGACATATATAAGAAGTTCAGGGAGCAAGCCGATGCGTCCCAGACAGAGATGGCTTTGTCACCTAGCAACAAGAGTGCGGCAAGACTAGGAAGTCTTCAGTAG 1800 0.4633 MATVAPTSCASGGGIEGCSRASRFAVHVIKGRWFSVCASFLVMIGPGSTYLFGIYSQEIKSALGYDQTTLNLLGFFKDMGTNIGVPAGLVAEVTPTWFVLLLGSALNLWGYLMIWLAVTARIARPKVWHMCVYNFVGSNSQNFANTGALVTCVKNFPESRGIMIGLLKGFVGLGGAIMTQFYFAIYGDDSKALILMVGWFPAALCVIFVYTIRTMKVVRQPNEVKMFYQFLYVSIVLALFLMVMTIVQKQIVFPRAAYAGSVTVVCVLLFLPFVIAIREELTFWNLERQHDNSPTEVTVEKPQEEESKPVALPPVSSTQEEEKPNSSSFFANVFKKPPRGEDYTILQALLSIDMLTLFLATMCGLGSSLTAIDNLGQIGGALGYPTRTISSFVSLVSIWNYFGRVFSGFVSEILIAKWKVPRPLMLTLTLVLLCVGHLMIAFPAPGSIYVASVFIGFAYGAQLTLIFAIISELFGLKYYATLFNCGQLATPIGTYVLNVKVTGMFYDQEALKELAKKGMTRSSVKELICIGVQCYKKSFIILAAGTLFGAAVSMILVIRTQEFYRGDIYKKFREQADASQTEMALSPSNKSAARLGSLQ* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1262 599 CDD MFS_Mch1p_like 31 550 - -
Vvi6g1262 599 Gene3D MFS general substrate transporter like domains 349 564 IPR036259 -
Vvi6g1262 599 Pfam Nodulin-like 32 277 IPR010658 -
Vvi6g1262 599 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 33 567 - -
Vvi6g1262 599 SUPERFAMILY MFS general substrate transporter 31 561 IPR036259 -
Vvi6g1262 599 MobiDBLite consensus disorder prediction 294 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1262 Vvi-Chr6 18106731 18108530 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1262 17 594 Nodulin-like Gene Family AT2G28120 64.533 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1262 - - vvi:100249900 1176.39