Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1261 ATGGGTGGGGCAGGAGAGAGCAGTACTGGTGGGTGTGGAAGCGGAGAGGTGGGCCGATTTGCAGTTCATGTGATTAGAGGGCGGTGGTTCTCGGTTTACGCCTCCTTCCTGATCATGGTGGGAGCCGGAGCAACTTATCTTTTCGGAATCTATTCAAAAGAAATAAAGTCTTCCATGGGGTACGACCAGTCTACCTTAAATCTCATAGGATTCTTCAAAGATCTGGGTGCAAACGTGGGTGTCCCGGCAGGGCTTATTGCTGAGGTAACGCCCACATGGTTCGTCCTCTTGGTCGGCTCTGCACTGAATTTTTCGGGCTTCTTCATGATATGGCTGGCTGTGACGGGCCAAATAGCCAAGCCAAAGGTTTGGCAGATATGTGCCTACATCTGCGTTGGGGCCAATTCTCAGAACTTTGCAAATACAGGGGCCCTCGTCACCTCTGTCAAGAACTTCCCGGAGAGCCGGGGGGTCATGTTAGGCCTCTTGAAGGGCTTTGTGGGGCTCAGTGGTGCCATCATGACTCAAATATACTTTGCTGTCTATGGCAATGATTCAAAATCTCTCATTCTCCTCATCGGATGGTTCCCTGCGGCGATATCGGTAGTGTTTGTGTTCACAATCCGAACCATGAAGGTGGTTCGGCAGCCGAATGAGCTCAGAGTATTTTACCATTTCCTCTATGTATCGGTTGCACTGGCAGTGTTCCTCATGGTTATGACTATTCTTGAGAAACAGTTGGCTTTCCCCCGTGCTGCCTATGCCGGAAGCGTCACCGTCGTTTGTGCCTTGCTCTTTCTCCCTCTTGTCATCGCCATTAGACAAGAATTTGCCCCCTGGAACCAGCAGAAACAGCAGGACGATTCTCCCTCTGAGATTACCATCGAGAAGCCACAAGCAGTGGAATCGAAACTGGTGGCTTTGCCGCCAACCTCATCACCAAATCGAGAGGGCAAATCCAATTCCCCATCATGTTTCACTACCATTTTCCAGAAACCACCTAGAGGAGAAGACTACACCATCTTACAAGCCCTCCTAAGCATTGACATGTCCATCCTGTTCCTTGCAACTCTGTTCGGATTGGGGTCAAGTTTAACTGCCATTGACAACTTGGGTCAAATCGGAGAGTCCCTTGGCTACCCAACTAAAACCATAAGCTCCTTTGTGTCACTGGTAAGCATATGGAACTTCTTTGGGAGAGTCTTCGCCGGCTTTCTCTCGGAAGCTCTAGTAGCAAAATGGAAATTCCCTCGGACCCTTATGCTAACCTTAGTCCTTCTCCTGCTATGCGTTGGCCACCTCATGATCGCCTTCCCTATCTCCGGCTCAGTCTACGTAGCATCAGTGATCCTAGGATTCTCATTCGGAGCCCAATTGACTCTGCTTTTCACCATCATTTCCGAGCTCTTTGGCCTAAAGTACTACTCTACATTGTTCAATTGTGGACAACTGGCGTCTCCCCTTGGGACATATGTACTCAATGTGAAGATCACTGGAATGTTTTACGATAATGAGGCCCTGAAGGAGCTGGCAAAAAAGGGTATGACTAGATTATCTGTGAATGAACTGACTTGCCTTGGGGTCCGATGTTATAGGAAATCCTTTATAATTTTGGCTGCCGGCACTTTTTTTGGAGCCCTTGTTTCACTGATTTTGGTGATTAGAACCCGACAATTTTACAAAGGGGACATATACAAGAAGTTCAAAGAGGAAACGAAGCCCTCCGAAATCAATATGGCTTCGGCCTCCACCGTCGATGGGCGATGA 1767 0.4861 MGGAGESSTGGCGSGEVGRFAVHVIRGRWFSVYASFLIMVGAGATYLFGIYSKEIKSSMGYDQSTLNLIGFFKDLGANVGVPAGLIAEVTPTWFVLLVGSALNFSGFFMIWLAVTGQIAKPKVWQICAYICVGANSQNFANTGALVTSVKNFPESRGVMLGLLKGFVGLSGAIMTQIYFAVYGNDSKSLILLIGWFPAAISVVFVFTIRTMKVVRQPNELRVFYHFLYVSVALAVFLMVMTILEKQLAFPRAAYAGSVTVVCALLFLPLVIAIRQEFAPWNQQKQQDDSPSEITIEKPQAVESKLVALPPTSSPNREGKSNSPSCFTTIFQKPPRGEDYTILQALLSIDMSILFLATLFGLGSSLTAIDNLGQIGESLGYPTKTISSFVSLVSIWNFFGRVFAGFLSEALVAKWKFPRTLMLTLVLLLLCVGHLMIAFPISGSVYVASVILGFSFGAQLTLLFTIISELFGLKYYSTLFNCGQLASPLGTYVLNVKITGMFYDNEALKELAKKGMTRLSVNELTCLGVRCYRKSFIILAAGTFFGALVSLILVIRTRQFYKGDIYKKFKEETKPSEINMASASTVDGR* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1261 588 CDD MFS_Mch1p_like 27 546 - -
Vvi6g1261 588 Gene3D MFS general substrate transporter like domains 344 578 IPR036259 -
Vvi6g1261 588 Pfam Nodulin-like 28 273 IPR010658 -
Vvi6g1261 588 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 29 563 - -
Vvi6g1261 588 SUPERFAMILY MFS general substrate transporter 33 563 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1261 Vvi-Chr6 18099977 18101743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1261 13 586 Nodulin-like Gene Family AT2G28120 69.097 0.0 824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1261 - - vvi:100244770 1133.24