Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1259 ATGGAGGCTGAACAGCGTGATGGGTTCACTCTCACCTTGCCCCCCTTGCATGTGGGCTCTACCTCTTTCTTCAAGACCTGTTTCAATGGACTCAATGCTTTATCAGGAGTTGGGATCCTTTCCATCCCATATGCCCTTTCATCGGGAGGGTGGTTGAGCTTGGTTCTTCTACTTGTTATCGCCACTGCAACTTTCTACACAGGCTTGCTACTCAGAAGATGTATGGATGCCCATCCAAATATCCGAACTTACCCTGATGTTGGCGAGCGAGCATTTGGGAAGAAGGAAAGATTACTCGTATCTGTTTTCATGTATACCGAGCTCTACTTGGTTGCAACAGGCTTTCTAATCCTCGAAGGGGATAATCTACATAATCTGTTTCCGAACATGGGGCTTGAGATTTGGGGATTAGTGATTGATGGGAGACGAAGCTTCATAATCATTGTGGGCCTTGTTATTTTGCCTTCTGTCTTGGTGAACAACCTCAATATTCTTTCTTGTATATCAGCCATCGGTGTTTTAGCTTGTATCATCATTCTTGGCTCAATTCTATGGACCGGGGCCTTTGATGGAGTTGGATTTGATGAGAAGGGAACAAGTCTAAATTGGCAGGGAATCCCCACTGCTATTAGCTTATATGCCTTCTGTTATTGTGCCCATCCGGTCTTCCCCACCTTGTACACTTCTATGAGGAAGAAGCATCAATTTTCTAATGTAAGTTTGAAATCTTCAATTATTTTTTACATGTCCAATTGTTCAGTGATGCGACGCTAG 774 0.4393 MEAEQRDGFTLTLPPLHVGSTSFFKTCFNGLNALSGVGILSIPYALSSGGWLSLVLLLVIATATFYTGLLLRRCMDAHPNIRTYPDVGERAFGKKERLLVSVFMYTELYLVATGFLILEGDNLHNLFPNMGLEIWGLVIDGRRSFIIIVGLVILPSVLVNNLNILSCISAIGVLACIIILGSILWTGAFDGVGFDEKGTSLNWQGIPTAISLYAFCYCAHPVFPTLYTSMRKKHQFSNVSLKSSIIFYMSNCSVMRR* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1259 257 Gene3D Amino acid/polyamine transporter I 20 235 - -
Vvi6g1259 257 Pfam Transmembrane amino acid transporter protein 20 248 IPR013057 -
Vvi6g1259 257 PANTHER OS05G0424000 PROTEIN-RELATED 31 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1259 Vvi-Chr6 18078299 18079171 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1259 5 241 Amino Acid or Auxin Permease AAAP Family AT3G28960 62.025 2.61e-101 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1259 K15015 - vvi:100267088 498.049