Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1247 ATGGCTTCCTGCTCTATTGCCACTTCTCTATCGCGCCTCTCTCTCCTCCGTCTAATCCCCAAACCCTCTTCTTCTTATTCTTCTTCAATTCCTCTTTTTCCTACCACTACTCGGAAGGATCCGAGTAGGTTTCGGTTGTTTTCGGCGTCAATGGCTTCTGAACCCAAGGAATCTCCCTCTAACAATCCGGGCCTCCATTCCAGCCCTGATGAGGCCACTAAAGGATACTTCATGCAACAGACTATGTATCGGATTAAGGACCCTAAAGTCAGTCTCGATTTCTATTCTCGCGTATTGGGAATGTCGCTACTTAAACGGTTGGATTTTCCAGAGATGAAGTTTAGCCTGTACTTTATGGGGTATGAGGATACAGCATCAGCTCCCAGTAATGAAACTGAAAGAATCGTCTGGACCTTTAGTCAAAAGGCTACTATTGAGCTCACACACAACTGGGGTACTGAGAGTGATCCTGACTTCAAAGGTTACCACAATGGGAACTCAGAACCTCGTGGATTTGGACACATAGGCATCACAGTCGATGACACATACAAGGCATGCGAAAGATTTGAACGTCTAGGGGTTGAGTTTGTAAAAAAACCAGATGATGGTAAAATGAAAGGGTTAGCATTCATTAAGGATCCTGATGGCTATTGGATTGAAATCTTTGACCTTAGAAGAATTGGAACTGTGAGTACCACTGCTGCTTGA 708 0.4449 MASCSIATSLSRLSLLRLIPKPSSSYSSSIPLFPTTTRKDPSRFRLFSASMASEPKESPSNNPGLHSSPDEATKGYFMQQTMYRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPSNETERIVWTFSQKATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDTYKACERFERLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLRRIGTVSTTAA* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1247 235 ProSitePatterns Glyoxalase I signature 1. 80 101 IPR018146 GO:0004462|GO:0046872
Vvi6g1247 235 MobiDBLite consensus disorder prediction 53 68 - -
Vvi6g1247 235 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 77 224 IPR037523 -
Vvi6g1247 235 NCBIfam lactoylglutathione lyase 78 224 IPR004361 GO:0004462|GO:0046872
Vvi6g1247 235 Gene3D - 47 227 IPR029068 -
Vvi6g1247 235 MobiDBLite consensus disorder prediction 51 71 - -
Vvi6g1247 235 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 68 223 IPR029068 -
Vvi6g1247 235 FunFam Lactoylglutathione lyase 47 231 - -
Vvi6g1247 235 CDD GlxI_Zn 78 222 - -
Vvi6g1247 235 ProSitePatterns Glyoxalase I signature 2. 165 181 IPR018146 GO:0004462|GO:0046872
Vvi6g1247 235 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 33 229 - -
Vvi6g1247 235 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 80 221 IPR004360 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1247 12 235 Calmodulin-binding Proteins AT1G08110 73.333 2.24e-114 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1247 K01759 - vvi:100244888 457.603