Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1231 ATGGATCTTTGTCCTGCTCTATGCTACTCCATGGGTGTAGAGTTGTCCATTGATAACGTAATTGCAGAATATTTCTATGATAGGTTCAATCTCAAGCTACACACTGCCGGAATCATTGCCGCCACCTTCGGCATGGCCAACCTCGTGGCCCGCCCCTTTGGTGGATACAGTTCAGACTTAGCAGGCCGAAGATTCGGCATGAGGGGCAGGCTATGGACCCTTTGGATCCTCCAAACTCTTGGAGGGGTATTCTGTATCTGGCTCGGCCGTGCCAATTCACTTCCCATTGCAGTCTTGGCCATGATGCTCTTCTCCGTTGGAGCTCAGGCCGCATGTGGAGCAACTTTTGGCATCGTTCCTTTCATTTCTCGACGATCTTTGGGCATAATATCTGGCCTAACCGGTGCAGGTGGGAACTTTGGCTCCGGACTGACCCAGTTGGTGTTCTTCAGCTCCTCAAAATTCTCCACAGCAACAGGCCTCTCCTTAATGGGGGCCATGATTGTCGCTTGCACTCTTCCCGTGACATTGGTGCACTTCCCACAGTGGGGAAGCATGTTCCTCCCACCTTCAAAGGACGTGATAAAAGGTACTGAAGAACACTATTACGAGTCCGAGTGGAATGAGGAGGAGAAGCAGAAGGGTATGCACCAGGGAAGTCTCAAGTTCGCGGAGAACAGCCGGTCAGAGCGTGGCAAACGCGTTGCCTCAGCACCAACCCCTCCCAATTCTACACCATCTCATGTTTAG 750 0.5187 MDLCPALCYSMGVELSIDNVIAEYFYDRFNLKLHTAGIIAATFGMANLVARPFGGYSSDLAGRRFGMRGRLWTLWILQTLGGVFCIWLGRANSLPIAVLAMMLFSVGAQAACGATFGIVPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSSSKFSTATGLSLMGAMIVACTLPVTLVHFPQWGSMFLPPSKDVIKGTEEHYYESEWNEEEKQKGMHQGSLKFAENSRSERGKRVASAPTPPNSTPSHV* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1231 249 Gene3D MFS general substrate transporter like domains 3 185 IPR036259 -
Vvi6g1231 249 SUPERFAMILY MFS general substrate transporter 7 178 IPR036259 -
Vvi6g1231 249 MobiDBLite consensus disorder prediction 205 232 - -
Vvi6g1231 249 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 8 235 IPR044772 GO:0015112
Vvi6g1231 249 FunFam Nitrate transporter 2.1 4 185 - -
Vvi6g1231 249 MobiDBLite consensus disorder prediction 205 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1231 Vvi-Chr6 17701953 17702881 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1231 9 249 Inorganic Solute Cotransporters AT1G08090 78.008 4.68e-140 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1231 K02575 - vvi:100253304 485.723