Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1230 ATGAGTGACATTGAAGGGTCCCCAGGAAGCTCCATGCATGGAGTCACAGGCCGAGAACAAACCTTTGCCTTTTCAGTGGCTTCCCCAATCGTCCCAACTGACACCTCTGCTAACTTTGCTTTACCGGTCGATTCTGAGCATAAGGCCAAGGTTTTCAAGATCCTTTCCTTTGCCAATCCTCATATGAGAACCTTTCACCTCTCTTGGATCTCCTTCTTCACTTGTTTTGTTTCCACTTTTGCCGCTGCTCCTCTTGTCCCCATCATACGCGACAACCTCAACCTTACGAAAGGAGACGTTGGAAATGCTGGAGTGGCTTCTGTTTCAGAAGCATTTTCTCCAGGCTAG 348 0.4828 MSDIEGSPGSSMHGVTGREQTFAFSVASPIVPTDTSANFALPVDSEHKAKVFKILSFANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKGDVGNAGVASVSEAFSPG* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1230 115 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 112 IPR044772 GO:0015112
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1230 Vvi-Chr6 17701345 17701692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1230 1 109 Inorganic Solute Cotransporters AT5G60770 81.651 6.50e-60 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1230 K02575 - vvi:100241340 218.779