Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1193 ATGGAGAGAGTGACTCCATTCCTCAACCTGGTCAACGACCCCACCATTGAACACATCATCACTCTTCGCATTGCTCTCACCACTGCTGAATATTTAGCATATGAATGTGGCAAACATGTTCTTGTCATACTAGCAGATATGAGTTCTGATGCAGATGCTCTTTATGAGGTATCTGCTGCCCGAGAAGAAGTTCCCGGAAGGCGTGGGTATCCTGGGTATATGTGTGCTGATCTGGCGACAATTTACGAACGTGCTGGAGCCTGGACGTATTGA 273 0.4725 MERVTPFLNLVNDPTIEHIITLRIALTTAEYLAYECGKHVLVILADMSSDADALYEVSAAREEVPGRRGYPGYMCADLATIYERAGAWTY* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1193 90 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 1 86 IPR022879 -
Vvi6g1193 90 Gene3D - 1 89 - -
Vvi6g1193 90 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 1 87 IPR000194 GO:0005524
Vvi6g1193 90 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 88 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1193 Vvi-Chr6 16990191 16990463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1193 1 86 Primary Pumps ATPases(2) AT1G20260 89.535 3.37e-47 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1193 K02147 - ming:122073968 149.443