Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1183 ATGATGGATCTCAACGCCGCTGCTCTCTTCTTCTGTTTATGCCTCTCCTTCATCTTCTTCCGTTCTCTCCGTTCTCCTCCCACCAAAAATTCATGTCCACACTCATACCCCATCATCGGAAACCTTATCGCTTTACTCCGCAACCGCCACCGCTTCCACGACTGGGTTGCTGACATGCTTTCTAGAACCCCTTCCCTCACTCTCCAAGTCAACACCTTCCTCAACGCCTCCCATGGCGTCTGCACTGCCAACCCACTCAACGTCAACCACCTCCTCGTCTCCAACTTCCCCAACTACATCAAAGGCTCCCGCTTCCATGACTTCTTTCATGAACTCCTTGGAGATGGAATCTTTAACGTCGATGGTCACCTCTGGACTGTCCAACGCAAGATCTCCAGCCACGAATTCAACACCAAGTCTCTCAAACACTTCATCTCAGACACAGTCCAGTCCGAACTCTCCACTCGCCTTATTCCCTTCCTCTCTTCTGCATGTGAAAACAACCAAGTCATCGATCTCCAAGACGTTCTGCGGAAGGCTATGTTCGACAACATTTGTAATCTTGCATTTGGTGCCGATCCTGCATGTTTGAGCTCTGAAGCAGTAGGTGAAAATTCGTTGAATTTATCTTTTGTTCAGGCGTTCGATGATGCCGTGGAGATCAGTGCATCACGATCCTTGTTACCCATCCATGTGATATGGAAGATCAAGAGATTCTTCAATATAGGTTCTGAGAAACGATTGAAGGAAGCGGTTGGCATAATCAACGAATACGCTAATATGATCCTCAAGTCCAAAGAAGATCAGATCGGCTCAGGAGATTGTGGAAACCTGGATTTGCTATCTCGATTCATGTCCTCGAGCTCAAATTTCGGCTTAGGGTTTGACGATCAAGAACACAAGAGGAAGTTCTTGAGGGACATTGTTATAAGCTTCATACTCGCCGGCAAGGACTCCACGTCAACAGCGTTGACGTGGTTCTTCTGGCTGATGGCCGGAAACCCTCGATGCGAGGGCTTGATCTTGGCGGAACTATCAGAGGCATCTCCGGCACCGGCGACGTCGCCGGTGATATTCAGCTATGACGATCTGAAGGGGTTGAATTATCTGCATGCGGCCATATCAGAGTCGCTGCGTCTGTTTCCGCCCGTGCCAATTGATTCGAGATTAGCGGTAGATGATGACATTCTCCCAGATGGGACTCACGTGCGTAAAGGGTGGTTTGCTGATTACTCAGCTTATGCGATGGGGAGGATGCATCAAGTGTGGGGTCCTGACTGTAGGGAGTATAGACCGGAGAGGTGGTTGGATGACGATGGACGATTTCGACCGTCGGATCAGTTTCGGTTTCCGGTGTTTCACTGCGGGCCCAGGTTGTGCTTGGGGAAGGAGATGGCGTATGTGCAGATGAAGTCGATTGCTGCAAGCGTGATGCGTGAGTTTGAGATAGTGGCCGTTGATGGAGGTGGGTGTGCAGGGAAGATGGCAGACCCGCCTTACACACCATCCATTGTCCTTAAGATGAGGGGTGGCCTACCTGTACGGGTGAAGAGACGGCGACAGCCCAACGCCATCGACTTTTGTTAG 1587 0.5035 MMDLNAAALFFCLCLSFIFFRSLRSPPTKNSCPHSYPIIGNLIALLRNRHRFHDWVADMLSRTPSLTLQVNTFLNASHGVCTANPLNVNHLLVSNFPNYIKGSRFHDFFHELLGDGIFNVDGHLWTVQRKISSHEFNTKSLKHFISDTVQSELSTRLIPFLSSACENNQVIDLQDVLRKAMFDNICNLAFGADPACLSSEAVGENSLNLSFVQAFDDAVEISASRSLLPIHVIWKIKRFFNIGSEKRLKEAVGIINEYANMILKSKEDQIGSGDCGNLDLLSRFMSSSSNFGLGFDDQEHKRKFLRDIVISFILAGKDSTSTALTWFFWLMAGNPRCEGLILAELSEASPAPATSPVIFSYDDLKGLNYLHAAISESLRLFPPVPIDSRLAVDDDILPDGTHVRKGWFADYSAYAMGRMHQVWGPDCREYRPERWLDDDGRFRPSDQFRFPVFHCGPRLCLGKEMAYVQMKSIAASVMREFEIVAVDGGGCAGKMADPPYTPSIVLKMRGGLPVRVKRRRQPNAIDFC* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1183 528 CDD CYP86A 73 512 - -
Vvi6g1183 528 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1183 528 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1183 528 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1183 528 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1183 528 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1183 528 Gene3D Cytochrome P450 21 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1183 528 SUPERFAMILY Cytochrome P450 33 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1183 528 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1183 528 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1183 528 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1183 528 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1183 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Vvi6g1183 528 PANTHER CYTOCHROME P450 19 513 - -
Vvi6g1183 528 Pfam Cytochrome P450 33 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1183 Vvi-Chr6 16905816 16907402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1183 34 519 Cytochrome P450 AT3G56630 45.697 3.66e-150 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1183 - - vri:117916368 1037.33