Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1140 ATGTTGAGAGCTGCTCATCTCCCACCAGGTGCATCTCCAGCTCTCGTTGCACTGAAACTATCTTTGATTCCCACTCTCAACCTCACATCCCCTTCAATCATTCGCAAATTCTCTTCATTTTCTTCTCTACACGCATTTCTCCCCAAAACATTCCTACCCAGTTCACCTTATCCTCTTTCTCTTGGCCTAAAGAGATTCCCTCCCATGGTGGCTCAGCCATGTCCCAGAGCTTCATTTAGTTCTGGGGGCAACACTGGAAGTGGTAGGGAAATATTGGTTCAGCACTTGCTTGTCAAGGAGGATGACCTTAAGCTTCTATTGGAGCTTCAGCAGAGGATTTCTGGCGGAGTGGATTTGAGTGATCTGGCTGTGGAGTACTCAATTTGTCCGTCCAAAGAAGAGGGTGGAATGCTTGGATGGGTGAGAAAGGGGCAAATGGTACCAGAGTTTGAGGAGGCTGCATTTAAGGCACCTTTAAACAAAGTTGTAAGGTGTAAAACAAAATTTGGATGGCACTTGTTGCAAGTTATATCTGAAAGGGAAGAATCATTACTTCAAGACATTCAACCTGTGGAGCTTCATGCAAAAATGCAAGATCCCAATTTTTTTGAAGAGGTTCAGTTGATTGATGTTCGAGAACCTGAGGAAGTGGCTCAAGCGTCATTGCCAGGTTTTCAGGTTCTTCCCCTCCAACAATTTGGGAACTGGGGACCAGAAATAACCACTAAATTTGATCCTGAGAAGGATACTTATCTTATGTGTCACCATGGCATGCGGTCATTACAGGTTGCCAAGTGGTTGCAGACACAGGGTTTTAAGCGAGTATTCAATGTGTCTGGAGGAATTCATGCGTATGCTACCAAGGCTGATCCTTCAATCCCCACTTACTAA 891 0.4489 MLRAAHLPPGASPALVALKLSLIPTLNLTSPSIIRKFSSFSSLHAFLPKTFLPSSPYPLSLGLKRFPPMVAQPCPRASFSSGGNTGSGREILVQHLLVKEDDLKLLLELQQRISGGVDLSDLAVEYSICPSKEEGGMLGWVRKGQMVPEFEEAAFKAPLNKVVRCKTKFGWHLLQVISEREESLLQDIQPVELHAKMQDPNFFEEVQLIDVREPEEVAQASLPGFQVLPLQQFGNWGPEITTKFDPEKDTYLMCHHGMRSLQVAKWLQTQGFKRVFNVSGGIHAYATKADPSIPTY* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1140 296 SUPERFAMILY FKBP-like 88 177 - -
Vvi6g1140 296 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 296 - -
Vvi6g1140 296 ProSiteProfiles Rhodanese domain profile. 202 294 IPR001763 -
Vvi6g1140 296 Pfam Rhodanese-like domain 192 286 IPR001763 -
Vvi6g1140 296 Gene3D - 181 292 IPR036873 -
Vvi6g1140 296 Gene3D - 87 180 IPR046357 GO:0003755
Vvi6g1140 296 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 88 178 IPR000297 GO:0003755
Vvi6g1140 296 SMART rhod_4 188 291 IPR001763 -
Vvi6g1140 296 Pfam PPIC-type PPIASE domain 101 178 - -
Vvi6g1140 296 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 185 294 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1140 Vvi-Chr6 16348919 16363405 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1140 18 296 Sulfurtransferasese or Rhodanese AT5G19370 57.447 3.83e-109 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1140 - - vvi:100244760 571.237