Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1138 ATGGCCATGGCCATAGACACAAGCTTCTTCATTGTGTCTGCTGCAGCAACTCTCCTCTTCTTAATCGTCCATTCCTTCATTCATTTTCTCGTCTCCAGACGTTCCCGGAAGCTCCCTCCTGGCCCAAAAGGATGGCCGCTTCTCGGTGTGCTTCCTCTTCTAAAAGAGATGCCTCATGTTGCCCTAGCAAAAATGGCCAAAAAGTATGGACCTGTAATGTTGCTGAAAATGGGTACCTCCAACATGGTGGTGGCCTCGAACCCGGAGGCCGCTCAAGCATTTCTTAAAACCCATGAGGCGAATTTTTTAAACCGTGAACCAGGTGCTGCCACAAGTCACTTGGTGTATGGTTGTCAAGACATGGTTTTCACTGAGTACGGTCAAAGGTGGAAGCTGCTACGAAGATTAAGCACTCTACACCTGCTTGGAGGGAAGGCTGTTGAGGGCTCATCTGAAGTCCGAGCTGCTGAGCTCGGCCGAGTGCTCCAGACCATGCTTGAGTTTAGCCAGCGAGGCCAGCCAGTGGTGGTGCCGGAGTTGTTAACGATTGTCATGGTCAACATAATATCACAAACGGTACTTAGCCGTCGGTTGTTCCAATCAAAAGAATCGAAGACGAATAGCTTTAAGGAGATGATTGTGGAGTCAATGGTATGGGCCGGGCAATTCAACATTGGCGATTTTATTCCATTCATTGCTTGGATGGACATCCAAGGGATCTTGCGACAGATGAAGCGTGTTCATAAGAAGTTCGACAAGTTTTTGACAGAGTTGATAGAGGAACACCAGGCATCAGCGGATGAGCGCAAGGGAAAACCAGATTTTCTCGATATAATTATGGCCAACCAAGAAGATGGTCCTCCGGAGGACAGAATTACCCTAACCAACATTAAGGCCGTCCTCGTGAATTTATTTGTGGCGGGAACAGACACATCATCAAGCACAATTGAATGGGCACTGGCTGAGATGTTGAAAAAACCTAGCATCTTCCAGCGTGCTCATGAAGAAATGGATCAAGTGATTGGGAGGAGCCGCCGGCTTGAGGAATCCGACTTACCAAAACTCCCATATCTACGAGCCATATGTAAGGAAAGTTTCCGACTGCACCCATCAACCCCATTGAACCTCCCCCGCGTCGCAAGTGAAGCATGTGAAGTGAACGGATACTACATTCCAAAGAACACTAGAGTCCAAGTGAACATATGGGCGATTGGGCGAGACCCCGATGTGTGGGAAAACCCCGAAGATTTCGCACCAGAGAGATTTCTAAGTGAAAAACATGCGAACATCGATCCACGTGGGAACGATTTTGAGTTGATTCCGTTTGGGTCGGGAAGAAGGATCTGTTCCGGCAATAAGATGGCAGTGATCGCAATTGAGTACATTTTGGCCACATTGGTGCACTCATTTGACTGGAAACTCCCAGATGGCGTTGAGCTCAACATGGATGAAGGTTTTGGGCTTACGCTGCAGAAGGCTGTTCCGCTTTTGGCTATGGTGACTCCCCGGCTGGAGCTGAGTGCATATGCTGCTTGA 1536 0.4857 MAMAIDTSFFIVSAAATLLFLIVHSFIHFLVSRRSRKLPPGPKGWPLLGVLPLLKEMPHVALAKMAKKYGPVMLLKMGTSNMVVASNPEAAQAFLKTHEANFLNREPGAATSHLVYGCQDMVFTEYGQRWKLLRRLSTLHLLGGKAVEGSSEVRAAELGRVLQTMLEFSQRGQPVVVPELLTIVMVNIISQTVLSRRLFQSKESKTNSFKEMIVESMVWAGQFNIGDFIPFIAWMDIQGILRQMKRVHKKFDKFLTELIEEHQASADERKGKPDFLDIIMANQEDGPPEDRITLTNIKAVLVNLFVAGTDTSSSTIEWALAEMLKKPSIFQRAHEEMDQVIGRSRRLEESDLPKLPYLRAICKESFRLHPSTPLNLPRVASEACEVNGYYIPKNTRVQVNIWAIGRDPDVWENPEDFAPERFLSEKHANIDPRGNDFELIPFGSGRRICSGNKMAVIAIEYILATLVHSFDWKLPDGVELNMDEGFGLTLQKAVPLLAMVTPRLELSAYAA* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1138 511 SUPERFAMILY Cytochrome P450 39 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1138 511 FunFam Flavonoid 3',5'-hydroxylase 2 30 500 - -
Vvi6g1138 511 Gene3D Cytochrome P450 30 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1138 511 PANTHER CYTOCHROME P450 98A9 13 509 - -
Vvi6g1138 511 Pfam Cytochrome P450 39 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1138 511 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1138 511 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1138 511 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1138 511 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1138 511 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1138 511 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1138 511 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1138 511 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1138 511 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1138 511 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1138 511 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1138 511 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1138 Vvi-Chr6 16319309 16321386 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1138 8 510 Cytochrome P450 AT5G07990 44.706 3.08e-169 486