Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1137 ATGAAAATAATTGATCAATTTAATTTAAATATTATTTTTTATATTTTTCTTCTACCATTTCCCATTATTTTCTTTTTCTTTTTTTCACATTTTTTTTCAACTTGTCCGAGAACCAAACATAGTCTAAACAATTGGATTGAAATTGAATCACAAACATGGAATAATTATTCTCATCTTTTATATACTAAGATCTCAGCCAACTTAGTGTTGCTGCAGAGCAGATTAAGCAATATGGGTGATAACAGCAACTCAACCCTGTTTTCTTCAGTCCTCTTCCTTTCCCCAGCTAATGCTGCAACCATAGACGATCTGTTGTCTCATCTCAACTTCCTCTTGCTTACCTTCATCACATCCATCTTTTTCATCCTAACCAAGTTCAAATTCAAAACCAGTACCAACAGCAAGGCAATGCTGCTTCCTCCAGGCCCAGCTCCATGGCCTCTAGTCCGAAATCTACCTCATTTACTCAACAACAAGCCAACTTTCCGCTGGATACATGGCTTTATGAAAGAAATGAACACTGAAATTGCATGTATTCAATTGGGCAATGTTCATGTAATCCCGGTGACTTCCCCAGAGATTAGCAAAGAATTTTTGAAGAAACATGATGCAGTATTTGCATCCAGGCCCATTACAATGGCGTCTGAGTATTCAAGTGGTGGCTTCTTGACCACAGCGGTGGTGCCATGGGGAGACCAGTGGAAGAAGATGAGAAGGGTTCTAGCTTCTAACGTGATTAATCCATCAACATTTAGGTGGCTGCATGACAAGAGGGTGGAAGAAACCGACAATCTTGTCCGATACGTTTATAACCAGTGTAAGATCTCTACTAGCAATAACTGTCTTGGCTCAGTTATCAACCTCAGAAATACAGCCCGTCAATATAGCGGAAACGCCATCAGGAAGATGATCCTCAACACAAGATACTTTGGTGAAGGAAAGAAAGATGGAGGCCCTGGAGTTGAAGAGGAGCAACATGTTGAGTCACTCTTTACCGTACTTGCTCATCTATATGCGTTCTCTTTATCTGATTACTTCCCTTGGCTTAGAGTGCTGGACATAGATGGCCATGAGAAGACTGTAAGGGAGGCTATGAACACCATTAACAAGTATCATGATCCGATCGTGGACCAAAGAGTAGAACAATGGAGGAATGGCGAAAAGAAGGAGGCTGAGGACCTGCTTGACGTTTTCATTTCAGTTAAGGATTCAAATGGGGAGCCACTGCTGTCTGTGGCTGAGATCAAAGCCCAATGCACAGAGTTGATGCTTGCAGCAGTGGATAATCCATCAAATGCAATTGAGTGGGCATTGGCAGAAATGATCAATCAACCAAGGGTTTTGGGGAAAGCAGTGGAGGAAATAGATAGAGTGGTTGGAAAGGAGAGACTGGTCCAGGAATCCGACTTTCAGCAGCTAAACTATGTTAAGGCCTGCATAAAGGAAGCTTTCCGGCTTCACCCAATTGCACCATTTAATCTTCCCCATGTATCCAATGCCGATGCCATTGTTGCTGGCTACTTCATCCCCAAAGGCAGTCATGTCCTTCTCAGCCGTCTGGGGCTTGGGCGGAACCCTAGAATCTGGGAAGAACCACTCATTTTCAATCCAGAGCGCCATCTGAGTGCTAGTAGAGCTCAAGGAGTGGATTTGAACGAGCAAGACCTTCGCCTCATTTCCTTCAGTACAGGAAGGCGTGGGTGCACAGGGATTGCATTCGGGTCTGCAATGACTGTGATGCTGTTAGTAAGGCTCCTTCAAGGCTTCACTTGGAGTCCGCCACCGGGCCAAGAGGAGATTGATCTCTCAGAGTCGAGAAATGATCTCTTTCTAGCAAAACCTCTGCATGCCCTAGCAAAACCACGTCTGCATTCATCATTATACCCACTTCATTAA 1896 0.4357 MKIIDQFNLNIIFYIFLLPFPIIFFFFFSHFFSTCPRTKHSLNNWIEIESQTWNNYSHLLYTKISANLVLLQSRLSNMGDNSNSTLFSSVLFLSPANAATIDDLLSHLNFLLLTFITSIFFILTKFKFKTSTNSKAMLLPPGPAPWPLVRNLPHLLNNKPTFRWIHGFMKEMNTEIACIQLGNVHVIPVTSPEISKEFLKKHDAVFASRPITMASEYSSGGFLTTAVVPWGDQWKKMRRVLASNVINPSTFRWLHDKRVEETDNLVRYVYNQCKISTSNNCLGSVINLRNTARQYSGNAIRKMILNTRYFGEGKKDGGPGVEEEQHVESLFTVLAHLYAFSLSDYFPWLRVLDIDGHEKTVREAMNTINKYHDPIVDQRVEQWRNGEKKEAEDLLDVFISVKDSNGEPLLSVAEIKAQCTELMLAAVDNPSNAIEWALAEMINQPRVLGKAVEEIDRVVGKERLVQESDFQQLNYVKACIKEAFRLHPIAPFNLPHVSNADAIVAGYFIPKGSHVLLSRLGLGRNPRIWEEPLIFNPERHLSASRAQGVDLNEQDLRLISFSTGRRGCTGIAFGSAMTVMLLVRLLQGFTWSPPPGQEEIDLSESRNDLFLAKPLHALAKPRLHSSLYPLH* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1137 631 PANTHER CYTOCHROME P450 98A9 115 628 - -
Vvi6g1137 631 Pfam Cytochrome P450 140 613 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1137 631 FunFam Cytochrome P450 9 132 626 - -
Vvi6g1137 631 SUPERFAMILY Cytochrome P450 140 622 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1137 631 PRINTS P450 superfamily signature 559 568 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1137 631 PRINTS P450 superfamily signature 425 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1137 631 PRINTS P450 superfamily signature 478 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1137 631 Gene3D Cytochrome P450 133 626 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1137 631 CDD CYP79 174 623 - -
Vvi6g1137 631 PRINTS E-class P450 group I signature 414 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1137 631 PRINTS E-class P450 group I signature 194 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1137 631 PRINTS E-class P450 group I signature 568 591 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1137 631 PRINTS E-class P450 group I signature 477 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1137 631 PRINTS E-class P450 group I signature 518 542 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1137 631 PRINTS E-class P450 group I signature 434 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1137 631 PRINTS E-class P450 group I signature 558 568 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1137 Vvi-Chr6 16313817 16317109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1137 112 629 Cytochrome P450 AT5G05260 61.742 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1137 K12153 - vvi:100260154 965.296