Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1136 ATGGCGAATAGTACCAACTTAATATTGCGGCAGAGAAGATTTAGCAATATGAGTAGTAGCAGCAACTCCACCCTATTTTCTTCAATTCTCTTCCTTTCCCCAGCTAATGATCCTGCCATAGACGATGTGTTGTCTCATCTCACCTTCCTCTTGATGCTCTTCATCATATCCGTCATTCTCATCTTCACCAAATTCAAATCCAAAACCAGTACCAACAGCAAGTCAATGATGCTTCCTCCAGGGCCAGCTCCATGGCCACTAGTCCGAAATCTACCTCATTTACTCAACAAGAAGCCTACTTTCCGCTGGATACATGGCCTTATGAAAGAAATGAACACTGAAATCGCGTGTATCCAGTTGGGCGATGTTCATGTCATCCCGGTGACTTCCCCAGAGATCAGCAGAGAAGTTTTGAAGAAACATGACACAGTATTTGCATCCAGGCCCATTACAATGGCGACTGAGTATTCAAGTGGTGGCTTCTTGACCACAGCGGTGGTGCCATGGGGAGACCAGTGGAAGAAGATGAGAAGGGTTCTAGCTTCTAAAGTGATTAATCCATCAACATTTAGGTGGCTGCATGACAAGAGGGTGGAAGAAGCCGACAATCTTGTCCGATACGTTTATAACCAGTGTAAGATCTCTACTAGCAATAACTGTCTTGGCTCGGTTATCAACGTCAGAAATACAGTCCGTCAATATAGCGGAAACGCCATCAGGAAGATGATCCTCAACACAAGATACTTTGGTGAAGGAAAGAAAGATGGAGGCCCTGGAGTTGAAGAGGAACAACATGTTGAGTCACTCTTTACCGTACTTGCTCATATATATGCGTTCTCTTTATCTGATTACTTCCCTTGGCTTAGAGTACTGGACTTAGATGGCCATGAGAAGACTGTAAGGGAGGCTATGAACACTATTAACAAGTATCATGATCCGATCGTGGACCAAAGAGTAGAACATTGGAGGAATGGCGAAAAGAACGAGGCTGAGGACCTGCTTGACGTTTTCATTTCAGTTAAGGATTCAAATGGGGAGCCACTGCTGTCTGTGGCTGAGATCAAAGCCCAATGCACAGAGTTGATTTTTGCAGCAGTGGATAATCCATCAAATGCAATTGAGTGGGCAATGGCAGAAATGATCAATCAACCAAGGGTTTTGGGTAAAGCAGTGGAAGAAATAGATAGAGTGGTTGGAAAGGAGAGACTGGTCCAGGAATCCGACTTTCAGCAGCTAAACTATGTTAAGGCCTGCATAAAGGAAGCTTTCCGGCTTCACCCAATTGCACCATTTAATCTTCCCCATGTATCCAATGCCGATGCCATTGTTGCTGGCTACTTCATCCCCAAAGGCAGTCATGTCCTTCTCAGCCGTCTGGGGCTTGGCCGGAACCCTAGAATCTGGGAAGAACCACTAATATTCAATCCAGAGGGCCATCTGAATGCCAGTACAGCGCAAGGAGTGGATTTGAACAAGCAAGACCTTCGCCTCATTTCCTTCAGTACAGGAAGGCGTGGGTGCACAGGGCCGGGATTGCATTCGGGTCTGCAATGA 1554 0.4582 MANSTNLILRQRRFSNMSSSSNSTLFSSILFLSPANDPAIDDVLSHLTFLLMLFIISVILIFTKFKSKTSTNSKSMMLPPGPAPWPLVRNLPHLLNKKPTFRWIHGLMKEMNTEIACIQLGDVHVIPVTSPEISREVLKKHDTVFASRPITMATEYSSGGFLTTAVVPWGDQWKKMRRVLASKVINPSTFRWLHDKRVEEADNLVRYVYNQCKISTSNNCLGSVINVRNTVRQYSGNAIRKMILNTRYFGEGKKDGGPGVEEEQHVESLFTVLAHIYAFSLSDYFPWLRVLDLDGHEKTVREAMNTINKYHDPIVDQRVEHWRNGEKNEAEDLLDVFISVKDSNGEPLLSVAEIKAQCTELIFAAVDNPSNAIEWAMAEMINQPRVLGKAVEEIDRVVGKERLVQESDFQQLNYVKACIKEAFRLHPIAPFNLPHVSNADAIVAGYFIPKGSHVLLSRLGLGRNPRIWEEPLIFNPEGHLNASTAQGVDLNKQDLRLISFSTGRRGCTGPGLHSGLQ* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1136 517 FunFam Cytochrome P450 9 71 517 - -
Vvi6g1136 517 SUPERFAMILY Cytochrome P450 79 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1136 517 Gene3D Cytochrome P450 71 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1136 517 PRINTS E-class P450 group I signature 497 507 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1136 517 PRINTS E-class P450 group I signature 133 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1136 517 PRINTS E-class P450 group I signature 373 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1136 517 PRINTS E-class P450 group I signature 416 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1136 517 PRINTS E-class P450 group I signature 457 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1136 517 PRINTS E-class P450 group I signature 353 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1136 517 Pfam Cytochrome P450 79 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1136 517 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1136 517 PRINTS P450 superfamily signature 498 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1136 517 PRINTS P450 superfamily signature 364 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1136 517 PANTHER CYTOCHROME P450 98A9 51 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1136 Vvi-Chr6 16266089 16267754 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1136 51 516 Cytochrome P450 AT5G05260 59.705 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1136 K12153 - vvi:100260154 882.863