Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1132 ATGAGTGATGCTGAAGATGGTAGTGATGAAGGATCAGAGAGTGAAGAAGGTACCTGCATCTCTTCTGTTCAACCAGGAAAAAAGAGGCCAACTGAATCTGCCACAAAAACACTTGTTCCTGCTAAAAAGGCTAAATTAGTTTCACCTCAAAACACAGATGGTAAGAAGGGTGGGGCTCATACAGCAACTCCTCATCCTAACAAGAAGGCGGGGAAAACTCCTGCTACCGGTGACAAAGGCAAGGGGCAGAGCCCAAAATTCTGGTGGCCAAGTCTCTTGCAAATCTTGCAGCAAGACATTCAACTCAGAAAATGCGCTTCAATCCCATTCCAAGGCTAA 339 0.4572 MSDAEDGSDEGSESEEGTCISSVQPGKKRPTESATKTLVPAKKAKLVSPQNTDGKKGGAHTATPHPNKKAGKTPATGDKGKGQSPKFWWPSLLQILQQDIQLRKCASIPFQG* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1132 112 MobiDBLite consensus disorder prediction 14 31 - -
Vvi6g1132 112 MobiDBLite consensus disorder prediction 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1132 Vvi-Chr6 16128718 16130196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1132 42 81 C2H2 Transcription Factor Family AT5G03740 57.500 1.06e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1132 - - vvi:100256817 137.502