Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1130 ATGCCTCATGTTGCACTAGCAAAGATGGCCAAAAGATACGGACCTGTCATGTTCTTGAAAATGGGCACTAGCAGCATGGTGGTGGCCTCAACTCCGGAGGCAGCTCGGGCTTTCCTTAAAACCCTAGACATTAATTTCTCGAACCGCCCGCCTAATGCCGGTGCAACACACTTGGCCTATGGTGCCCAAGACATGGTTTTTGCGGATTATGGGCCAAGGTGGAAGCTACTGAGAAAGCTAAGCAACTTACACATGCTTGGTGGGAAGGCTCTTGAGGACTCGTCTCAGGTTCGAACTGTTGAGCTAGGTCACATGCTTCGAGCCATGCTTGAGTTGAGCCAGCGAGAGGAGCCGGTGGTGGTGCCGGAGATGTTATCTTTTTCCATCGCCAACATGATAGGGCAAGTGATACTAAGCCGCCGGGTGTTTGAAACAAAAGGGTCGGAGTCAAATGAGTTCAAGGACATGGTGGTGGAGCTCATGACCTGTGCTGGGTACTTCAATATTGGCGATTTTATTCCGTCCATTGCATGGATGGACATCCAAGGGATCGAGCGCGGGATGAAGCATTTACATAAGAAGTTCGACAAGTTATTGACAAGGATGATAGAGGAGCACACGGCATCAGCCCATGAGCGCAAGGGAAACCCAGATTTTCTGGACGTAGTCATGGACCATCAAGGAAATTCTACAGGGGAGAAGCTCACCCTTACCAACATTAAGGCGCTCCTCCAGAATTTATTTGCCGCGGGGACAGATACTTCAGCGAGCATAATCGAGTGGTCTCTGGCTGAGATGTTGAAAAACCCGAGCATCCTCAAGCGTGCTCAGGAAGAAATGGATCATGTGATTGGAAGGAACCGCCGGCTCGTGGAGTCTGACTTGCCAAAACTTCCATACCTACAAGCCATATGCAAGGAAAGCCTCCGGAAGCACCCATCAACCCCATTGAACCTTCCTCGTGTCTCAACCCAGGCATGTGAAGTGAACGGCTACTACATCCCGGAGAACACTAGACTCAGCGTGAACATATGGGCAATTGGGCGAGACCCTGATGTCTGGGAAAACCCCGAAGAATTCAGGCCAGAAAGATTTTTAAGTGGAAGAAATGCAAAAATTGATCCTCGTGGAAATGATTTTGAGTTGATCCCGTTTGGGGCTGGACGAAGGATTTGCGCTGGCGCTAGAATGGGAATAGTGCTGGTTGAGTACATTTTAGGGACGTTGGTACACTCATTTGACTGGAAAATTCCGGATGGAGTTGAGATCAACATGGACGAAGCTTTCGGGCTTGCACTGCAGAAGGCAGTTTCTCTTTCGGCTATGGTGACACCAAGGCTCCACCAGAGTGCGTATGCGGTTTGA 1365 0.4982 MPHVALAKMAKRYGPVMFLKMGTSSMVVASTPEAARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDSSQVRTVELGHMLRAMLELSQREEPVVVPEMLSFSIANMIGQVILSRRVFETKGSESNEFKDMVVELMTCAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHERKGNPDFLDVVMDHQGNSTGEKLTLTNIKALLQNLFAAGTDTSASIIEWSLAEMLKNPSILKRAQEEMDHVIGRNRRLVESDLPKLPYLQAICKESLRKHPSTPLNLPRVSTQACEVNGYYIPENTRLSVNIWAIGRDPDVWENPEEFRPERFLSGRNAKIDPRGNDFELIPFGAGRRICAGARMGIVLVEYILGTLVHSFDWKIPDGVEINMDEAFGLALQKAVSLSAMVTPRLHQSAYAV* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1130 454 PANTHER CYTOCHROME P450 98A9 2 452 - -
Vvi6g1130 454 Gene3D Cytochrome P450 1 446 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1130 454 PRINTS E-class P450 group I signature 10 29 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1130 454 PRINTS E-class P450 group I signature 34 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1130 454 PRINTS E-class P450 group I signature 382 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1130 454 PRINTS E-class P450 group I signature 259 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1130 454 PRINTS E-class P450 group I signature 239 256 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1130 454 PRINTS E-class P450 group I signature 343 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1130 454 PRINTS E-class P450 group I signature 392 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1130 454 PRINTS E-class P450 group I signature 128 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1130 454 PRINTS E-class P450 group I signature 302 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1130 454 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 385 394 IPR017972 GO:0005506|GO:0016705
Vvi6g1130 454 CDD CYP75 14 446 - -
Vvi6g1130 454 SUPERFAMILY Cytochrome P450 2 446 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1130 454 PRINTS P450 superfamily signature 250 267 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1130 454 PRINTS P450 superfamily signature 303 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1130 454 PRINTS P450 superfamily signature 383 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1130 454 Pfam Cytochrome P450 1 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1130 454 FunFam Flavonoid 3',5'-hydroxylase 2 1 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1130 Vvi-Chr6 16108482 16110643 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1130 2 454 Cytochrome P450 AT5G07990 46.204 4.60e-160 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1130 K13083 - vvi:100266025 897.501