Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1127 ATGTTGAAAAACCCGAGCATCCTCAAGCGTGCTCACGAAGAAATGGATCAAGTGATTGGAAGGAGCCGGCGGCTCGTGGAGTCTGACTTACAAAAACTTCCATACCTACAAGCCATATGCAAGGAAAGCTTCCGGAAGCACCCATCCACCCCATTGAACCTTCCTCGTGTCTCAAACGAGGCATGTGAAGTGAACGGCTACTACATCCCAAAGAACACTAGACTTAGCGTGAACATATGGGCAATCGGGCGAGACCCTGATGTCTGGGAAAGCCCGGAAGAATTCAGTCCAGAAAGGTTTCTAAGTGGAAGAAATGCAAAAATTGATCCTCGTGGAAATGATTTTGAGTTGATCCCGTTTGGGGCTGGACGAAGGATTTGTGCTGGCACTAGAATGGGAATAGTGCTAGTTGAGTACATTTTGGGGACGTTGGTACACTCATTTGACTGGAAAATGCCGGATGGAGTTGAGATCAACATGGACGAAGCTTTCGGGCTTGCTTTGCAGAAGGCAGTTTCTCTTTCGGCTATGGTGACACCTAGGCTTCACCAGAGTGCGTATGCAGTCTGA 570 0.4825 MLKNPSILKRAHEEMDQVIGRSRRLVESDLQKLPYLQAICKESFRKHPSTPLNLPRVSNEACEVNGYYIPKNTRLSVNIWAIGRDPDVWESPEEFSPERFLSGRNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKMPDGVEINMDEAFGLALQKAVSLSAMVTPRLHQSAYAV* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1127 189 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 120 129 IPR017972 GO:0005506|GO:0016705
Vvi6g1127 189 PRINTS E-class P450 group I signature 78 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1127 189 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1127 189 PRINTS E-class P450 group I signature 37 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1127 189 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1127 189 SUPERFAMILY Cytochrome P450 1 181 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1127 189 PRINTS P450 superfamily signature 38 49 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1127 189 PRINTS P450 superfamily signature 118 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1127 189 PRINTS P450 superfamily signature 3 16 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1127 189 PANTHER CYTOCHROME P450 98A9 1 187 - -
Vvi6g1127 189 Pfam Cytochrome P450 1 168 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1127 189 Gene3D Cytochrome P450 1 187 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1127 Vvi-Chr6 16059155 16059724 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1127 1 189 Cytochrome P450 AT5G07990 51.295 8.87e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1127 K13083 - vvi:100246462 385.956