Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1125 ATGATAGAGGAGCACACGGCATCAGCCCATGAGCGCAAGGGAAACCCAGATTTTCTGGACGTAGTCATGGGCCATCAAGGAAATTCTACAGGGGAGAAGCTCACCCTTACCAACATTAAGGCGCTCCTCCTGAATTTATTTACTGCAGGAACAGACACTTCATCAAGCGTAATCGAGTGGTCTCTGGCTGAGATGTTGAAAAACCCGAGCATCCTCAAGCGTGCTCACGAAGAAATGGATCAAGTGATTGGAAGGAGCCGGCGGCTCGTGGAGTCTGACTTACCAAAACTTCCATACCTACAAGCCATATGCAAGGAAAGCTTCCGGAAGCACCCATCCACCCCATTGAACCTTCCTCGTGTCTCAACCCAGGCATGTGAAGTGAACGGCTACTACATCCCAAAGAACACTAGACTTAGCGTGAACATATGGGCAATCGGGCGAGACCCTGATGTCTGGGAAAGCCCGGAAGAATTCAGGCCAGAAAGGTTTTTAAGTGGAAGAAATGCAAAAATTGATCCTCGTGGAAATGATTTTGAGTTGATCCCGTTTGGGGCTGGACGAAGGATTTGTGCTGGCACTAGAATGGGAATAGTGCTAGTTGAGTACATTTTGGGGACGTTGGTACACTCATTTGACTGGAAAATGCCGGATGGAGTTGAGATCAACATGGACGAAGCTTTCGGGCTTGCTCTGCAGAAGGCAGTTTCTCTTTCGGCTATGGTGACACCAAGGCTTCACCAGAGTGCGTATGCAGTCTGA 762 0.4895 MIEEHTASAHERKGNPDFLDVVMGHQGNSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRSRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWESPEEFRPERFLSGRNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKMPDGVEINMDEAFGLALQKAVSLSAMVTPRLHQSAYAV* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1125 253 Gene3D Cytochrome P450 1 245 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1125 253 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 243 - -
Vvi6g1125 253 FunFam Predicted protein 47 240 - -
Vvi6g1125 253 PRINTS E-class P450 group I signature 181 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1125 253 PRINTS E-class P450 group I signature 101 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1125 253 PRINTS E-class P450 group I signature 38 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1125 253 PRINTS E-class P450 group I signature 58 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1125 253 PRINTS E-class P450 group I signature 191 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1125 253 PRINTS E-class P450 group I signature 142 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1125 253 MobiDBLite consensus disorder prediction 1 18 - -
Vvi6g1125 253 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 184 193 IPR017972 GO:0005506|GO:0016705
Vvi6g1125 253 PRINTS P450 superfamily signature 49 66 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1125 253 PRINTS P450 superfamily signature 182 191 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1125 253 PRINTS P450 superfamily signature 102 113 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1125 253 Pfam Cytochrome P450 1 232 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1125 253 SUPERFAMILY Cytochrome P450 2 245 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1125 253 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1125 Vvi-Chr6 16049018 16050169 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1125 1 253 Cytochrome P450 AT5G07990 48.846 5.17e-90 273