Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1124 ATGGCCATAGATACAAGCCTCTTGCTTGAGTTTGCTGCAGCAACTCTACTCTTCTTCATCACCCGCTTCTTCATTCGTTCTATCCTTCCCAAACCTTCCCGGAAGCTCCCCCCTGGCCCCAAAGGGTGGCCGCTCCTCGGCGCTCTTCCTCTCGTAGGTAACATGCCTCATGTTGCATTAGCAAAGATGGCCAAAAGATACGGGCCTGTCATGTTCTTGAAAATGGGCACTAACAGCATGGTGGTGGCCTCAACTCCCGAGGCGGCTCGGGCTTTCCTTAAAACGCTAGACATTAATTTCTCTAGCCGCCCGCCTAATGCCGGTGCCACACTCTTGGCCTATCATGCCCAAGACATGGTTTTTGCGGATTATGGGGCAAGGTGGAAGCTACTGAGAAAGCTAAGCAACTTACACATGCTTGGTGGAAGGCTCTTGAGGACTGGTCTCAGGTCCGAGCTGTTGAGCTAG 468 0.5256 MAIDTSLLLEFAAATLLFFITRFFIRSILPKPSRKLPPGPKGWPLLGALPLVGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSSRPPNAGATLLAYHAQDMVFADYGARWKLLRKLSNLHMLGGRLLRTGLRSELLS* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1124 155 Pfam Cytochrome P450 37 142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1124 155 Gene3D Cytochrome P450 29 153 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1124 155 SUPERFAMILY Cytochrome P450 32 146 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1124 155 PANTHER CYTOCHROME P450 FAMILY 1 15 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1124 Vvi-Chr6 16048254 16048721 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1124 6 146 Cytochrome P450 AT5G07990 45.390 8.76e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1124 K13083 - vvi:100232896 233.032