Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1120 ATGGTTTTTGCGGATTATGGGGCAAGGTGGAAGCTACTGAGAAAGCTAAGCAACTTACACATGCTTGGTGGGAAGGCTCTTGAGGACTGGTCTCAGGTCCGAGCTGTTGAGCTAGGCCACATGCTTCGAGCCATGCTTGAGTTGAGCCAGCGAGCGGAGCCGGTGGTGGTGCCGGAGATGTTAACTTTTTCCATGGCCAACATGATAGGTCAAGTGATTCTAAGCCGCCGGGTGTTTGAAACAAAAGGGTCGGAGTCAAATGAGTTCAAGGACATGGTGGTGGAGCTCATGACCACTGCTGGGTACTTCAATATTGGCGATTTTATTCCGTCCATCGCATGGCTGGACATCCAAGGGATCCAGCACGGGATGAAGCATTTACATAGGAAGTTCGATCGGTTATTAACAAAGATGATGGAGGAGCACACGGCGTCAGCCCATGAGCGGAAGGGAAACCCAGATTTTCTGGACGTGATCATGGCAAACCAAGAAAATTCTACAGGGGAGAAGCTCACTATTACCAACATTAAAGCACTCCTCCTGAATTTATTTACTGCAGGAACAGACACTTCATCGAGCGTAATCGAGTGGTCTCTGGCTGAGATGTTGAAAAACCCGAGCATCCTCAAGCGTGCTCACGAAGAAATGGATCAAGTGATTGGAAGGAGCCGGCGGCTCGTGGAGTCTGACTTGCCAAAACTTCCATACCTACAAGCCATATGCAAGGAAAGCTTCCGGAAGCACCCATCCACCCCATTGAACCTTCCTCGTGTCTCAACCCAAGCATGCGAAGTGAACGGCTACTACATCCCAGAGAACACTAGACTTAGCGTGAACATATGGGCAATTGGGCGAGACCCTGATGTCTGGGAAAGCCCGGAAGAATTCAGGCCAGAAAGGTTTTTAAGTGGAAGAAATGAAAAAATTGATCCTCGTGGAAATGATTTTGAGTTGATCCCGTTTGGGGCTGGACGAAGGATTTGCGCTGGCACTAGAATGGGAATAGTGCTGGTTGAGTACATTTTAGGGACGTTGGTACATTCATTTGACTGGAAAATGCCGGATGGAGTTGAGATCAACATGGACGAAGCTTTCGGGCTTGCACTGCAGAAGGCAGTTTCTCTTTCGGCCATGGTGACACCAAGGCTTCACCAGAGTGCGTATGCAGTCTGA 1173 0.4919 MVFADYGARWKLLRKLSNLHMLGGKALEDWSQVRAVELGHMLRAMLELSQRAEPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWLDIQGIQHGMKHLHRKFDRLLTKMMEEHTASAHERKGNPDFLDVIMANQENSTGEKLTITNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRSRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPENTRLSVNIWAIGRDPDVWESPEEFRPERFLSGRNEKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKMPDGVEINMDEAFGLALQKAVSLSAMVTPRLHQSAYAV* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1120 390 PRINTS P450 superfamily signature 186 203 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1120 390 PRINTS P450 superfamily signature 239 250 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1120 390 PRINTS P450 superfamily signature 319 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1120 390 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 321 330 IPR017972 GO:0005506|GO:0016705
Vvi6g1120 390 SUPERFAMILY Cytochrome P450 2 382 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1120 390 PRINTS E-class P450 group I signature 328 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1120 390 PRINTS E-class P450 group I signature 195 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1120 390 PRINTS E-class P450 group I signature 279 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1120 390 PRINTS E-class P450 group I signature 238 256 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1120 390 PRINTS E-class P450 group I signature 318 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1120 390 PRINTS E-class P450 group I signature 64 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1120 390 PRINTS E-class P450 group I signature 175 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1120 390 Pfam Cytochrome P450 2 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1120 390 PANTHER CYTOCHROME P450 98A9 1 388 - -
Vvi6g1120 390 FunFam Uncharacterized protein 138 382 - -
Vvi6g1120 390 Gene3D Cytochrome P450 1 382 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1120 Vvi-Chr6 15956585 15958161 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1120 1 390 Cytochrome P450 AT5G07990 45.980 1.52e-135 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1120 K13083 - vvi:100243414 782.326