Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1110 ATGGCCATAGATACAAGCCTCTTGCTTGAGTTTGCTGCAGCAACTCTACTCTTCTTCATCACCCGCTTCTTCATTCGTTCTCTCCTTCCCAAACCTTCCCGGAAGCTCCCCCCTGGCCCCAGAGGGTGGCCGCTCCTCGGCGCTCTTCCTCTTCTAGGTAACATGCCTCATGTTGCATTAGCAAAGATGGCCAAAAGATACGGGCCTGTCATGTTCTTGAAAATGGGCACTAACAGCATGGTGGTGGCCTCAACTCCCGAGGCGGCTCGGGCTTTCCTTAAAACGCTAGACATTAATTTCTCTAACCGCCCGCCTAATGCCGGTGCCACACTCTTGGCCTATCATGCCCAAGACATGGTTTTTGCGGATTATGGGGCAAGGTGGAAGCTACTGAGAAAGCTAAGCAACTTACACATGCTTGGTGGGAAGGCTCTTGAGGACTGGTCTCAGGTCCGAGCTGTTGAGCTAGGCCACATGCTTCGAGCCATGCTTGAGTTGTGCCAGCGAGCGGAGCCGGTGGTGGTGCCGGAGATGTTAACTTTTTCCATGGCCAACATGATAGGTCAAGTGATTCTAAGCCGCCGGGTGTTTGAAACAAAAGGGTCGGAGTCAAATGAGTTCAAGGACATGGTGGTGGAGCTCATGACCAGTGCTGGGTACTTCAATATTGGCGATTTTATTCCGTCCATCGCATGGCTGGACATCCAAGGGATCCAGCGCGGGATGGAGCATTTACATAGGAAGTTCGACTGGTTATTAACAAAGATGATGGAGGAGCACACGGCGTCAGCCCATGAGCGGAAGGGAAACCCAGATTTTCTGGACGTAATCATGGCAAACCAGGAAAATTCTACAGGGGAGAAGCTCACTATTACCAACATTAAAGCACTCCTCCTGAATTTATTTACTGCAGGAACAGACACTTCATCAAGCGTAATCGAGTGGTCTCTGGCTGAGATGTTGAAAAACCCGAGCATCCTCAAGCGTGCTCACGAAGAAATGGATAAAGTGATTGGAAGGAGCCGGCGGCTCGTGGAGTCTGACTTGCCAAAACTTCCATACCTACAAGCCATATGCAAGGAAAGCTTCCGGAAGCACCCATCCACCCCATTGAACCTTCCTCGTGTCTCAACCCAAGCATGTGAAGTGAACGGCTACTACATCCCAGAGAACACTAGACTTAGCGTGAACATATGGGCAATTGGGCGAGACCCTGATGTCTGGGAAAGCCCGGAAGAATTCAGGCCAGAAAGGTTTTTAAGTGGAAGAAATGAAAAAATTGATCCTCGTGGAAATGATTTTGAGTTGATCCCGTTTGGGGCTGGACGAAGGATTTGCGCTGGCACTAGAATGGGAATAGTGCTGGTTGAGTACATTTTAGGGACGTTGGTACATTCATTTGACTGGAAAATGCCGGATGGAGTTGAGATCAACATGGACGAAGCTTTCGGGCTTGCGCTGCAGAAGGCAGTTTCTCTTTCGGCCATGGTGACACCAAGGCTTCACCAGAGTGCGTATGCAGTCTGA 1527 0.5016 MAIDTSLLLEFAAATLLFFITRFFIRSLLPKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATLLAYHAQDMVFADYGARWKLLRKLSNLHMLGGKALEDWSQVRAVELGHMLRAMLELCQRAEPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTSAGYFNIGDFIPSIAWLDIQGIQRGMEHLHRKFDWLLTKMMEEHTASAHERKGNPDFLDVIMANQENSTGEKLTITNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDKVIGRSRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPENTRLSVNIWAIGRDPDVWESPEEFRPERFLSGRNEKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKMPDGVEINMDEAFGLALQKAVSLSAMVTPRLHQSAYAV* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1110 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Vvi6g1110 508 Pfam Cytochrome P450 37 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1110 508 PANTHER CYTOCHROME P450 98A9 12 506 - -
Vvi6g1110 508 FunFam Flavonoid 3',5'-hydroxylase 2 28 497 - -
Vvi6g1110 508 Gene3D Cytochrome P450 29 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1110 508 SUPERFAMILY Cytochrome P450 37 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1110 508 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1110 508 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1110 508 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1110 508 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1110 508 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1110 508 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1110 508 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1110 508 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1110 508 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1110 508 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1110 508 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1110 508 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1110 508 CDD CYP75 68 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1110 Vvi-Chr6 15718279 15720208 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1110 6 508 Cytochrome P450 AT5G07990 45.205 2.83e-171 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1110 K13083 - vvi:104877273 954.896