Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1109 ATGGCCATAGATACAAGCCTCTTGCTTGAGCTTGCTGCAGCAACTCTACTCTTCTTCATCACCCGCTTCTTCATTCGTTCTCTCCTTCTCAAATCTTCCCGGAAGCTCCCTCCTGGCCCCAAAGGGTGGCCGCTCGTCGGCGCTCTTCCTCTTCTAGGTAACATGCCTCATGTTGCATTAGCAAAGATGGCCAAAAGATACGGGCCTGTCATGTTCTTGAAAATGGGCACTAACAGCATGGTGGTGGCCTCAACTCCCGGGGCGGCTCGGGCTTTCCTTAAAACGCTAGACATTAATTTCTCTAACCGCCCGCCTAATGCCGGTGCGACACTCTTGGCCTATCATGCCCAAGACATGGTTTTTGCGGATTATGGGGCAAGGTGGAAGCTACTGAGAAAGCTAAGCAACTTACACATGCTTGGTGGGAAGGCTCTTGAGGACTGGTCTCAGGTCCGAGCTGTTGAGCTAGGCCACATGCTTCGAGCCATGCTTGAGTTGAGCCAGCGAGCGGAGCCGGTGGTGGTGCCGGAGATGTTAACTTTTTCCATGGCCAACATGATAGGGCAAGTGATACTAAGCCGCCGGGTGTTTGAAACAAAAGGGTCGGAGTCAAATGAGTTCAAGGACATGGTGGTGGAGCTCATGACCACTGCTGGGTACTTCAATATTGGCGATTTTATTCCGTCCATCGCATGGCTGGACATCCAAGGGATCCAGCGCGGGATGAAGCATTTACATAGGAAGTTCGACCGGTTATTAACAAAGATGATGGAGGAGCACACGGCGTCAGCCCATGAGCGGAAGGGAAACCCAGATTTTCTGGACGTAATCATGGCAAACCAAGAAAATTCTACAGGGGAGAAGCTCACTATTACCAACATTAAAGCACTCCTCCTGGAACAGACACTTCATCGAGCGTAA 921 0.5114 MAIDTSLLLELAAATLLFFITRFFIRSLLLKSSRKLPPGPKGWPLVGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPGAARAFLKTLDINFSNRPPNAGATLLAYHAQDMVFADYGARWKLLRKLSNLHMLGGKALEDWSQVRAVELGHMLRAMLELSQRAEPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWLDIQGIQRGMKHLHRKFDRLLTKMMEEHTASAHERKGNPDFLDVIMANQENSTGEKLTITNIKALLLEQTLHRA* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1109 306 Gene3D Cytochrome P450 29 303 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1109 306 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1109 306 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1109 306 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1109 306 SUPERFAMILY Cytochrome P450 30 300 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1109 306 Pfam Cytochrome P450 37 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1109 306 PANTHER CYTOCHROME P450 FAMILY 1 16 299 - -
Vvi6g1109 306 FunFam Uncharacterized protein 30 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1109 Vvi-Chr6 15714628 15715979 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1109 6 299 Cytochrome P450 AT5G07990 40.940 2.03e-79 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1109 K13083 - vvi:100261319 562.762