Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1108 ATGATCAAGCAACCAGGGATTTTGAGCAAAGCAGTGAAGAAATTGATGGAGTGGTTGGAAAGGATAGACGAGTTCAGGAATCCGACTAGTGTTGCTGGGTACTCTATCCCCAAAGGCAGTCATGTCCTTCTGAGCCGTCTGGGGCTGGGCCGGAACCCTAGAATCTGGGAAGAACCGCTAAATTTCAATCCAGAGCGGCATCTGAATGCTAGTACAGTTCAAGCAGTGGAGTTGAACGAGCCAAACCTTCGCTTCATTTCCTTCAGTACTGGAAGGCGTGGGTGTGCAGGGATGTTAGCAAGGCTCCTTCAAGGCTTTACTTGGAGTCCGCCACCGGGCCAAAAGGAGATTGATTTCTCAGAGTCGAGAAATGATCTCTCTCTCTTGCAAAACCTCTGCATGCCCTAG 408 0.4975 MIKQPGILSKAVKKLMEWLERIDEFRNPTSVAGYSIPKGSHVLLSRLGLGRNPRIWEEPLNFNPERHLNASTVQAVELNEPNLRFISFSTGRRGCAGMLARLLQGFTWSPPPGQKEIDFSESRNDLSLLQNLCMP* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1108 135 PRINTS E-class P450 group I signature 85 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1108 135 PRINTS E-class P450 group I signature 45 69 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1108 135 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 88 97 IPR017972 GO:0005506|GO:0016705
Vvi6g1108 135 FunFam Phenylalanine N-monooxygenase 19 130 - -
Vvi6g1108 135 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 26 122 - -
Vvi6g1108 135 SUPERFAMILY Cytochrome P450 25 115 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1108 135 Pfam Cytochrome P450 27 125 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1108 135 Gene3D Cytochrome P450 19 127 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1108 Vvi-Chr6 15672868 15673275 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1108 29 132 Cytochrome P450 AT5G05260 56.140 6.71e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1108 - K12153 vvi:100265738 278.485