Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1107 ATGGAGGAGCACACGGCGTCAGCCCATGAGCGGAAGGGAAACCCAGATTTTCTGGACGTAATCATGGCAAACCAAGAAAATTCTACAGGGGAGAAGCTCACTATTACCAACATTAAAGCACTCCTCCTGAATTTATTTACTGCAGGAACAGACACTTCATCAAGCGTAATCGAGTGGTCTCTGGCTGAGATGTTGAAAAACCCGAGCATCCTCAAGCGTGCTCACGATGAAATGGATAAAGTGATTGGAAGGAGCCGGCGGCTCGTGGAGTCTGACTTGCCAAAACTTCCATACCTACAAGCCATATGCAAGGAAAGCTTCCGGAAGCACCCATCCACACCACTGAACCTTCCTCGTGTCTCAACCCAGGCATGTGAAGTGAACGGCTACTACATCCCAAAGAACACTAGACTTAGTGTGAACATATGGGCAATCGGGCGAGACCCTGATGTCTGGGAAAGCCCGGAAGAATTCAGGCCAGAAAGGTTTTTAAGTGGAAGAAATGAAAAAATTGATCCTCGTGGAAATGATTTTGAGTTGATCCCGTTTGGGGCTGGACGAAGGATTTGCGCTGGCACTAGAATGGGAATAGTGCTGGTTGAGTACATTTTAGGGACGTTGGTACATTCATTTGACTGGAAAATGCCGGATGGAGTTGAGATCAACATGGACGAAGCTTTCGGGCTTGCGCTGCAGAAGGCAGTTTCTCTTTCGGCCATGGTGACACCAAGGCTTCACCAGAGTGCGTATGCAGTCTGA 759 0.4835 MEEHTASAHERKGNPDFLDVIMANQENSTGEKLTITNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHDEMDKVIGRSRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWESPEEFRPERFLSGRNEKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKMPDGVEINMDEAFGLALQKAVSLSAMVTPRLHQSAYAV* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1107 252 FunFam Uncharacterized protein 1 244 - -
Vvi6g1107 252 PRINTS E-class P450 group I signature 57 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1107 252 PRINTS E-class P450 group I signature 37 54 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1107 252 PRINTS E-class P450 group I signature 100 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1107 252 PRINTS E-class P450 group I signature 180 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1107 252 PRINTS E-class P450 group I signature 190 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1107 252 PRINTS E-class P450 group I signature 141 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1107 252 PRINTS P450 superfamily signature 48 65 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1107 252 PRINTS P450 superfamily signature 101 112 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1107 252 PRINTS P450 superfamily signature 181 190 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1107 252 PANTHER CYTOCHROME P450 98A9 1 250 - -
Vvi6g1107 252 SUPERFAMILY Cytochrome P450 4 244 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1107 252 Gene3D Cytochrome P450 1 244 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1107 252 Pfam Cytochrome P450 1 231 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1107 252 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 183 192 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1107 Vvi-Chr6 15670735 15671896 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1107 1 252 Cytochrome P450 AT5G07990 48.263 9.98e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1107 K13083 - vvi:104877273 506.523