Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1106 ATGTTGAAAAACCCGAGCATCCTCAAGCGTGCTCACGAAGAAATGGATCAAGTGATTGGAAGGAGCCGGCGGCTCGTGGAGTCTGACTTGCCAAAACTTCCATACCTACAAGCCATATGCAAGGAAAGCTTCCGGAAGCACCCATCCACCCCATTGAACCTTCCTCGTGTCTCAACCCAAGCATGTGAAGTGAACGGCTACTACATCCCAGAGAACACTAGACTTAGCGTGAACATATGGTGA 243 0.4979 MLKNPSILKRAHEEMDQVIGRSRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPENTRLSVNIW* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1106 80 SUPERFAMILY Cytochrome P450 1 80 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1106 80 Pfam Cytochrome P450 1 80 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1106 80 Gene3D Cytochrome P450 1 80 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1106 80 PANTHER CYTOCHROME P450 98A9 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1106 Vvi-Chr6 15666626 15666868 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1106 1 80 Cytochrome P450 AT5G07990 51.250 1.77e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1106 K13083 - vvi:100267840 166.777