Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1030 ATGATACCTCGCATTCACCAGGGCTTTGTAATTCAAAATGTACAGTTAAAGGATGAGCTCTTATCTGTGTTAGAGTCAAATTCTGGTCAAGATAATGCACCTCTGTCTGCAAAGAGACGTGTAGAAAGGCGGGATTACAAAAAGCTGCATGATGAGGCATATGGAAACGTTTCTTCTGATTCAAGTGATGATGAAGACTTGACAGAGAATGTTATACCAAGAAAGAGGAAGATATAA 237 0.3882 MIPRIHQGFVIQNVQLKDELLSVLESNSGQDNAPLSAKRRVERRDYKKLHDEAYGNVSSDSSDDEDLTENVIPRKRKI* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1030 78 MobiDBLite consensus disorder prediction 52 78 - -
Vvi6g1030 78 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 13 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1030 Vvi-Chr6 14201634 14201870 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1030 12 57 Homeobox Transcription Factor Family AT3G19510 50.000 3.06e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1030 - - vvi:100254410 114.775