Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1026 ATGATGGAGCTGAGTAAAGGGACCACATTCCTTCCCCAATTTCGAGTTTCTTTGCCTTACATCACTTGCCCCGTCTGCAAACGCTTTAGAGTTTCGGCTTCCTTTGGCGGATGGAAAAAGCTTGAGGCACATTGCAATAATAGTGAAAGTATTCGGCACTCAGCTATTTCTAAGAGTGATAGTTCAAGGCTTCCTGAGCTCTCTTTCAACCGTTTACAACTTACCGACGAGGAATATTGTGGATTGCAAAGACGGAATTTTGGTAGATTTGTTGCACGTGAAGCTGTACTGGATGAAGAATATTGGACAGCAGCATGGCTGCGGGCAGAAGCCCATTGGGAATCTTTATCATATATGCGGCATGTTGATAATTATAAAAGGAAGTACGCTGAAGAGGAGTTCTATGCTTTGAAACGACGATGTGCTGGGCAAGATGGAAATTTATTGAAGTGCTTCTGTTTTGTTGCAGTTAAGGAGGAGAAAAATATACGAAGAACCGTCTTAAACAGTGTTGTGGGAACTCTGGACCTAAGCATTCGACAATATATACGAGGGGAAACATACCCCGGGGAGATTAAAAGATTGTCTTCTGTCTTGGCAAGTCCAGAGCCCTTTGATGCGCATAAATATGCTTACATTGCCAATGTTTGTGTTTCAAAATTTGCCCGACGCCAGGGAATTGCACTAAACATGCTTTCTTTGGCCAATGATGTTGCCTCCTCAGCCGGTATGAAGCAACTATTTGTTCATGTAAATGCAGACAACAAACCTGCTCAAGAACTGTACAAAAGAACTGGCTTTAAGATTGTAGAAGCTTCTTCATCTCCTCTATCAAAAGACCAAAGGCTTCTGATGTCAATGGAATTGTAA 870 0.423 MMELSKGTTFLPQFRVSLPYITCPVCKRFRVSASFGGWKKLEAHCNNSESIRHSAISKSDSSRLPELSFNRLQLTDEEYCGLQRRNFGRFVAREAVLDEEYWTAAWLRAEAHWESLSYMRHVDNYKRKYAEEEFYALKRRCAGQDGNLLKCFCFVAVKEEKNIRRTVLNSVVGTLDLSIRQYIRGETYPGEIKRLSSVLASPEPFDAHKYAYIANVCVSKFARRQGIALNMLSLANDVASSAGMKQLFVHVNADNKPAQELYKRTGFKIVEASSSPLSKDQRLLMSMEL* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1026 289 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 44 288 - -
Vvi6g1026 289 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 131 274 IPR016181 -
Vvi6g1026 289 Gene3D - 91 288 - -
Vvi6g1026 289 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 120 289 IPR000182 GO:0016747
Vvi6g1026 289 Pfam Acetyltransferase (GNAT) family 150 267 IPR000182 GO:0016747
Vvi6g1026 289 CDD NAT_SF 206 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1026 Vvi-Chr6 14155325 14172586 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vvi6g1026 Acetyltransf_1 6.7e-10 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1026 - - vvi:100244484 575.089