Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1010 ATGCTTTCTTCATTTCTCTTTCTTTCCCTAGCTAATACTGCTACCAAAGACCATGTCTTGGCTCATCTCAACTTCGTCTTGCTGCTTTTCTGCGTATCCATCTTAGTCATCTTCACCAAATTCAAATCCAACACCAGCACCAGCAGCAAGGGAATGCACCTTCCTCCAGGCCCAGCTCCATGGCCACTACTCCGAAATCTTCCTGACTTACTCAAGAACAAGCCAGTTTTCCGGTGGATACATGGATTCATGAAAGAAATGAACACCGAAATTGCATGTATTCAGTTGGGCAACGTTCATGTTATACCGGTGATTTCTCCAGAGATTAGCAGAGAATTTTTGAAGAAACATGACGCAATATTTGCGTCCAGGCCTGTTACAATGGCGTCTGAGTATTCAAGCGGTGGCTTCTTGACAATAGCAGTGGTGCCAAAGGGAACGCAGTGGAAGAAGATGAGAAGGGTTGTTGCTTCTGATGTCATTAACGAAACAACATTTAAGTGGCTGCATGACAAGAGAGTGGAAGAAGCCGACAATCTTGTTCGATTCATTTATAACCAGTGTAAAACCTTCACTAGCCCATCAATTATAAATGTAAGAAACACAGTCCGTCAATACAGTGGAAACGTCATTAGGAAGATGATCCTCAACACAAGATACTTTGGCGAAGGAAAGAAAGATGGAGGACCTGGAATCGAAGAGGAACAACATGTTGAATCCCTCTTCACTGTACTTGCTCACCTCTATGCATTCTCTTTGTCTGATTACTTCCCATGGATGAGAGTGCTGGACTTAGATGGGCATGAGAAGACTGTAAGGCAGGCTATGAATACCATTGACAAGTACCATGATCCCATCGTGGAGAATAGAGCAAAACAATGGAGGAATGGGGGGAAGAAGGAGGCTGAGGACCTTCTAGACATTTTCCTTTCAATCAAGGATGCACACGGTGAACCACTGCTGTCTGTGGCAGAGATCAAAGCCCAATGCACAGAGTTGATGCTTGCTGCAGTGGATAATCCATCAAACGCAATAGAGTGGGCAATGGCAGAGATGATCAATCAACCAGAGGTGTTGCGAAAGGCAGTGGAAGAAATAAATAGAGTGGTTGGAAAAGAGAGACTGGTTCAAGAATCGGACTTTGAGCAGCTCAACTATGTCAAGGCCTGTGCAAGGGAAGCATTTCGGCTGCACCCTATTGCACCCTTCCATCTCCCCCATGTCTCCACTTGTGATGCAGTTGTTGCTGGCTACTTTATTCCCAAAGGCAGTCATGTCCTCCTCAGCCGTCTGGGCCTGGGCCGGAACGGTAGAATCTGGGAAGAACCACTAAGGTTCAAACCGGAGAGGCATCTGAGTGAAGGTACAGGGAAAATGGTGGAGTTGACGGAGCCAGACCTTCGATTCATTTCCTTCGGCACTGGAAGACGTGGGTGCCCTGGAAAAGCAACGGGGTCTGCCATGACTGTGATGCTGCTAGCACGGCTTCTCCAAGGATTTACTTGGAGTGCACCACCGGAACAAAAGGAGATTGACCTCTCAGAATCAAGAAATGACCTCTCTCTGGAAAAACCACTGCATGCCGTTGCAAAACCTCGTTTGCATGCATCCCTCTACTCAGCTGCTTACCAATAA 1635 0.4654 MLSSFLFLSLANTATKDHVLAHLNFVLLLFCVSILVIFTKFKSNTSTSSKGMHLPPGPAPWPLLRNLPDLLKNKPVFRWIHGFMKEMNTEIACIQLGNVHVIPVISPEISREFLKKHDAIFASRPVTMASEYSSGGFLTIAVVPKGTQWKKMRRVVASDVINETTFKWLHDKRVEEADNLVRFIYNQCKTFTSPSIINVRNTVRQYSGNVIRKMILNTRYFGEGKKDGGPGIEEEQHVESLFTVLAHLYAFSLSDYFPWMRVLDLDGHEKTVRQAMNTIDKYHDPIVENRAKQWRNGGKKEAEDLLDIFLSIKDAHGEPLLSVAEIKAQCTELMLAAVDNPSNAIEWAMAEMINQPEVLRKAVEEINRVVGKERLVQESDFEQLNYVKACAREAFRLHPIAPFHLPHVSTCDAVVAGYFIPKGSHVLLSRLGLGRNGRIWEEPLRFKPERHLSEGTGKMVELTEPDLRFISFGTGRRGCPGKATGSAMTVMLLARLLQGFTWSAPPEQKEIDLSESRNDLSLEKPLHAVAKPRLHASLYSAAYQ* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1010 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Vvi6g1010 544 PANTHER CYTOCHROME P450 98A9 29 540 - -
Vvi6g1010 544 FunFam Cytochrome P450 9 47 537 - -
Vvi6g1010 544 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1010 544 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1010 544 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1010 544 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1010 544 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1010 544 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1010 544 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1010 544 PRINTS E-class P450 group I signature 109 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1010 544 Pfam Cytochrome P450 55 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1010 544 SUPERFAMILY Cytochrome P450 55 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g1010 544 Gene3D Cytochrome P450 48 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1010 Vvi-Chr6 13799987 13801712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1010 27 539 Cytochrome P450 AT5G05260 60.229 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1010 K12153 - vvi:100249616 1085.86