Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1004 ATGAGTTGCAAGGGAAAGGATAGTCTTGGTGAAGATGTTGTTAAACCATATACTCCAACCACTTTAGATTCAGATCTTGGATACTTTGAACTCGTTATAAAGATGTATCCACAAGGAAGGATGTCCCATCATTTTCGGGAGATGTGTGAAGGTGATTACCTGGCTGTGAAGGGACCTAAGGGGCGCTTCAAGTATCAGCCTGGCCAAGTTATAGCTTTTGGGATGCTTGCTGGAGGCACTGGCATCACTCCAATGTTCCAGGTCACTAGAGCCATATTAGAAAACCCAAGTGACAATACCAAGGTGCATCTTATTTATGCCAATGTCACATATGAGGACATTCTTTTAAAGGAAGAGCTGGATAATTTTGCTGCTAACTTTCCAAACCGCTTCACTGTCTATTATGTTCTGAATCAGCCACCTGAAGGATGGAATGGTGGTGTTGGGTTCGTGTCAAAGGAAATGATTCAAACCCACTGCCCACCTCCAGCAACCAATATTCAGATATTGAGGTGCGGGCCACCGCCCATGAACAAGGCCATGGCAGGTCACCTTGAGGCTCTTGGATACACTTCCCAAATGCAGTTCAAGTTCTGA 597 0.4489 MSCKGKDSLGEDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMCEGDYLAVKGPKGRFKYQPGQVIAFGMLAGGTGITPMFQVTRAILENPSDNTKVHLIYANVTYEDILLKEELDNFAANFPNRFTVYYVLNQPPEGWNGGVGFVSKEMIQTHCPPPATNIQILRCGPPPMNKAMAGHLEALGYTSQMQFKF* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1004 198 Pfam Oxidoreductase NAD-binding domain 75 181 IPR001433 GO:0016491
Vvi6g1004 198 SUPERFAMILY Riboflavin synthase domain-like 10 67 IPR017938 -
Vvi6g1004 198 CDD cyt_b5_reduct_like 10 198 - -
Vvi6g1004 198 FunFam NADH-cytochrome b5 reductase 56 198 - -
Vvi6g1004 198 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 54 192 IPR039261 -
Vvi6g1004 198 Gene3D Translation factors 1 56 - -
Vvi6g1004 198 Gene3D - 57 198 IPR039261 -
Vvi6g1004 198 Pfam Oxidoreductase FAD-binding domain 10 65 IPR008333 -
Vvi6g1004 198 PRINTS Cytochrome B5 reductase signature 74 93 - -
Vvi6g1004 198 PRINTS Cytochrome B5 reductase signature 112 123 - -
Vvi6g1004 198 PRINTS Cytochrome B5 reductase signature 168 176 - -
Vvi6g1004 198 PRINTS Cytochrome B5 reductase signature 15 22 - -
Vvi6g1004 198 PRINTS Cytochrome B5 reductase signature 51 65 - -
Vvi6g1004 198 PANTHER NADH-CYTOCHROME B5 REDUCTASE 9 198 IPR001834 GO:0016491
Vvi6g1004 198 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 168 176 IPR001709 GO:0016491
Vvi6g1004 198 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 74 93 IPR001709 GO:0016491
Vvi6g1004 198 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 112 123 IPR001709 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g1004 Vvi-Chr6 13687831 13698565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g1004 1 198 NADPH P450 reductases AT5G17770 80.303 8.25e-123 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1004 K00326 - vvi:100247986 417.927