Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0991 ATGGCCGAAGTCATCAACATGCCCCTCGACTCCCTCGACCGCCGCGACGGCAACGATAAATCAGCCGAAGAGCAGTCCCAGTCTCAGTCACCGTCACCGCCACCGCCACCTCCACCTCCGTCGTCGAGGAGACGCGACAGAAGAGACGACAGAGAACTCGATCGCCCTCCCAACCGACGCGCTGACTATTACGATCGGAACCGAAGCTCGCCGCCGAGGGAGAGGGATAGGGACTACAAGCGCCGGAGTAGCCCTAGCCCTCCTCCGCCATACCGCGACCGTCGCCACTCCCCTCCGCGGAGGTCGCCGCCGCTTCAGCCCTATAAGAGGTCCCGGAGAGATGATGCAGGCTATGATGGGAGGCGCGGGAGTCCCAGGGGAGGGTTTGGACCTGGAGATAGAAGGTTTGGGTATGATTATGCTAGTGGATATGAGCGTGAGATGGGGCCCAGACCTGGATATGCTGATGAAAGGCCTCATGGTCGTTATGTTGGTCGCCCATATCAAGTTGGCCCATTTGATTGGGATTCAGTTCGCAGTTATGGTGATGTTTCCAACATGGGGAATACCCAAAGAGAAGGCTTGATGTCATATAAGCAATTCATTCAGGAGCTTGAAGATGATATACTACCAGCTGAAGCTGAGCGTAGATATCAAGAATACAAGTCAGAGTACATTTCAACTCAGAAGCGGTCTTTTTTTGATTCCCATAAAGATGAGGAATGGTTGAAAGACAAATATCATCCAACAAACTTACTTAGTGTCATAGAAAGGAGGAATGAAGTTGCAAGGAAAACTGCGAAAGATTTTTTGCTTGATTTGCAAAGTGGAACACTTGACTTAGGACCTGGTGTCAATGCATCATCTTTAAACAAATCAGGACAGACTAGTGATCCAAACTCTGATGAAGAAACAGAAATGGGTGGCAAAAGAAGACGGCATGGTAGGGGACCAACTAAAGAAACTGATCTTCTTTCTGTTGCTCCCAAGGCTCATCCAGTCAGTTCTGAACCCAGACGAATCCAAGTTGACATTGAACAAGCTCAGGCCCTTGTACGTAAACTTGATTCTGAGAAAGGAATTGAGGAGAATATATTATGTAGAGCAGATAATGACAAATTGAACCGGGAGAAATCTCATGGTGGTTCCATTGGCCCTGTTATAATTATACGAGGTTTGACCTCTGTCAAGGGCCTTGAGGGCATAGAGTTGTTGGACACTCTGATTACATATCTTTGGCGAATCCATGGCTTGGATTATTATGGAATGCTAGAAACAAATGAAGCTAAGGGTCTCCGGCATGTTAGAGTGGAGGGCAAGAGTTCTGATTTAACAAGTAATGGGGTTGAGTGGGAAAAGAAGTTTGACTCACATTGGCAAGAGAGGTTGAGGAGTCAGGATCCATTGGAAATAATGACTGCTAAGGAAAAGATAGATGCTACTGCCATTGAATCTTTGGATCCCTATGTCCGAAAAATTAGGGATGAGAAGTATGGGTGGAAGTATGGTTGTGGGGCCAAAGGTTGTACAAAGCTCTTCCATGCTGCTGAATTTGTACACAAGCATCTAAAATTGAAACATCCAGAACTTGTGATGGAGCTGACTTCTAAAGTGCGTGAAGATCTGTATTTCCTGAACTATATGAGTGATGCAGATGCGCCTGGTGGGACACCTGTTATGCAGCAATCTCTACTGAAGGACAAGACACAGAAACGCAGGCTAGGTCCAGATAATCGATTGAAAGACAATCGTAGGGAACGTGAAAATCGAGCTAATGGCAGTGAAAGATATGATAGGTCTGATAACCATCAGTCAAATGATTTCCAGCCCAATGACGGTCCAGATGGGGGGAATCCTGGTGAAGGAATGTTTGACACTTTTGGTGGTCAAGGCATGCATGTTGCTCCTCCTTTTCCCTCAGATATGCCCCCTCCACCAGTATTGATGCCTGTTCCTGGTGCTGGTCCTTTGGGACCTTTTGTTCCTGCTCCACCTGAAGTTGCAATGCGTATGCTGCGAGAGCAGGGCGGGCCATCCCCTTTTGAAGGTGGGGGGAGGAATGGGAGGTCTGGGCCCCAGTTAAGTGGGCCAGCCCCAGTTCTTGCTTTATCTCCAGGTTTAAGACAAGATCCTCGGCGTCTACGAAGTTACCAGGACCTTGATGCCCCAGAGGATGAAGTCACTGTGATAGATTACAGGAGTTTGTAG 2208 0.4805 MAEVINMPLDSLDRRDGNDKSAEEQSQSQSPSPPPPPPPPSSRRRDRRDDRELDRPPNRRADYYDRNRSSPPRERDRDYKRRSSPSPPPPYRDRRHSPPRRSPPLQPYKRSRRDDAGYDGRRGSPRGGFGPGDRRFGYDYASGYEREMGPRPGYADERPHGRYVGRPYQVGPFDWDSVRSYGDVSNMGNTQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRSFFDSHKDEEWLKDKYHPTNLLSVIERRNEVARKTAKDFLLDLQSGTLDLGPGVNASSLNKSGQTSDPNSDEETEMGGKRRRHGRGPTKETDLLSVAPKAHPVSSEPRRIQVDIEQAQALVRKLDSEKGIEENILCRADNDKLNREKSHGGSIGPVIIIRGLTSVKGLEGIELLDTLITYLWRIHGLDYYGMLETNEAKGLRHVRVEGKSSDLTSNGVEWEKKFDSHWQERLRSQDPLEIMTAKEKIDATAIESLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVMELTSKVREDLYFLNYMSDADAPGGTPVMQQSLLKDKTQKRRLGPDNRLKDNRRERENRANGSERYDRSDNHQSNDFQPNDGPDGGNPGEGMFDTFGGQGMHVAPPFPSDMPPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPSPFEGGGRNGRSGPQLSGPAPVLALSPGLRQDPRRLRSYQDLDAPEDEVTVIDYRSL* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0991 735 MobiDBLite consensus disorder prediction 283 339 - -
Vvi6g0991 735 Pfam Arsenite-resistance protein 2 436 640 IPR007042 -
Vvi6g0991 735 Pfam SERRATE/Ars2, N-terminal domain 199 280 IPR021933 -
Vvi6g0991 735 MobiDBLite consensus disorder prediction 555 640 - -
Vvi6g0991 735 ProSitePatterns Zinc finger C2H2 type domain signature. 504 527 IPR013087 -
Vvi6g0991 735 MobiDBLite consensus disorder prediction 1 166 - -
Vvi6g0991 735 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 733 IPR039727 GO:0006397
Vvi6g0991 735 MobiDBLite consensus disorder prediction 107 121 - -
Vvi6g0991 735 MobiDBLite consensus disorder prediction 303 320 - -
Vvi6g0991 735 MobiDBLite consensus disorder prediction 41 100 - -
Vvi6g0991 735 MobiDBLite consensus disorder prediction 674 711 - -
Vvi6g0991 735 MobiDBLite consensus disorder prediction 283 302 - -
Vvi6g0991 735 MobiDBLite consensus disorder prediction 566 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0991 Vvi-Chr6 13426687 13464867 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0991 56 735 C2H2 Transcription Factor Family AT2G27100 70.073 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0991 - - vvi:100254817 1312.36