LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi6g0975	ATGATGATGTTTGATGAAATGGGAATTTGCGGTAATCTTGAGTTTATGTCCGTTCCTTTCATGGAAGGAGACATGGCTGCCTCTCAGCCTGAACAGGTGGCCCCTGTGGATGATGAATATACTGATGAAGAGATGGATGTGGATGAGCTACAGAGGAGGATGTGGAGAGATAAATTACGCCTCAAGCGGCTTAAGGAACAGAAAGAGGATCAGAATGGAGCTGATACTGTTAAGCAGCGGCAGTCTCAGGAGCAGGCAAGGAGGAAGAAAATGTCAAGGGCACAAGATGGGATACTGAAATACATGTTGAAGATGATGGAAGTTTGTAAAGCTCAGGGCTTTGTATATGGTATTATTCCAGAGAAGGGAAAGCCAGTGAGTGGGGCCTCTGACAATCTTCGAGAGTGGTGGAAGGACAAAGTCAGGTTTGATCGGAATGGCCCAGCTGCCATAGCAAAGTACCAAGCGGACAATTTGATCCCAGGGAAACAAGAAGGCTGTAATTCAGTTGGTCCTACTTCACACACCTTGCATGAGCTTCAAGACACAACCCTTGGTTCACTCTTATCTGCACTCATGCAGCATTGTGAACCCCCACAGAGGCGGTTTCCATTAGAGAAGGGTATCCCACCGCCATGGTGGCCTACTGGGAATGAGGAATGGTGGCCCCAGCTGGGTTCACCAAAAGATCAGGGTCCTCCTCCTTACAAAAAGCCTCATGATTTGAAGAAGGCATGGAAGGTGAGTGTTCTGACTGCAGTTATGAAGCATATGTCACCTGATATTTCAAAAATTCGCAAGCTTGTGAGGCAGTCCAAGTGCTTGCAAGACAAGATGACGGCCAAGGAGAGTGCCACATGGCTTGCTATCATCAACCAGGAGGAGGCCTTAGCCAGAAAGCTTTACCCTGATTACCGCCCCCCTTTGTCCTCTGCTAGTGGGAGTGGGTCTTTTTCCATCAAGGATTGCGGCGAGTACGATGTTGAAGGGGTTCAGGATGAACTGAGTTTTGAGATTCAGGAATGCAAACCTGATAGCAGCAATTTTTCCAATTTGAATGTGGAGAAAATGAGCCCAAGGCTGCCAGTTCCACAACTGCCTTACCCGATGAAGGGAGAAGTTGTCACCAACTTGGATTTCCTTCACAAGAGAAAGCCATCTCATGATCTGGAGATGATGATGGATCACAAGATTTATACATGCGAGTTTCTTCAGTGTCCTCACAGTGAACCCCAGTTCGGTTTCCATGACAGGATTTCTCGGGATAATCATCAACTGACTTGCTCTTATAGAAGCAATTCCTCAGAGTTTGGAATGTTGAATCTTCATGTTAATGAAGTTAAACCAGTTGCTTTCCCTCTACCCTTTGGCCAACCCAAGCCTGCCGCTCCAGCAGCTAACTCTGCCTCGGCTTCATTCGACCTATCAGGACTTGGAGTTCCTGAAGATGGTCAGAAAATGATTGGTGATCTCATGTCATTTTATGACACCAACATTCAAGGGAGCAAGGTCTCGAATCCCAGGAGCATTGCAGTCACAAATGACCAAAACCTTCAGCATCCGAAGCGTCAACATCATCAGAACAACTCCTTTCATGGATTCTTGCAAGAATCCAACATGACCCACAATCACCACATGTTCCCCCGAGAGGAAAGCCAGTTTGATCGGTCTAAGCTTTTGAATTCTCGATTCGAGACCAGCCCGAACGAAAACGCTTTCCAGTTTATATATGGGCCTGCTTTCGATTTGTCATCAATCGATTATGTGGAGGACATTCCAGCAACGACTGCAACAGATATTTCATCAAAGCAGGATGCTTCTATCTGGTATTGA	1833	0.4648	MMMFDEMGICGNLEFMSVPFMEGDMAASQPEQVAPVDDEYTDEEMDVDELQRRMWRDKLRLKRLKEQKEDQNGADTVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLREWWKDKVRFDRNGPAAIAKYQADNLIPGKQEGCNSVGPTSHTLHELQDTTLGSLLSALMQHCEPPQRRFPLEKGIPPPWWPTGNEEWWPQLGSPKDQGPPPYKKPHDLKKAWKVSVLTAVMKHMSPDISKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARKLYPDYRPPLSSASGSGSFSIKDCGEYDVEGVQDELSFEIQECKPDSSNFSNLNVEKMSPRLPVPQLPYPMKGEVVTNLDFLHKRKPSHDLEMMMDHKIYTCEFLQCPHSEPQFGFHDRISRDNHQLTCSYRSNSSEFGMLNLHVNEVKPVAFPLPFGQPKPAAPAANSASASFDLSGLGVPEDGQKMIGDLMSFYDTNIQGSKVSNPRSIAVTNDQNLQHPKRQHHQNNSFHGFLQESNMTHNHHMFPREESQFDRSKLLNSRFETSPNENAFQFIYGPAFDLSSIDYVEDIPATTATDISSKQDASIWY*	611

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Vvi6g0975	610	PANTHER	ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN	29	555	IPR006957	GO:0003700\|GO:0005634
Vvi6g0975	610	FunFam	Ethylene insensitive 3-like 1	168	305	-	-
Vvi6g0975	610	Pfam	Ethylene insensitive 3	48	295	IPR047091	GO:0003700
Vvi6g0975	610	Coils	Coil	47	67	-	-
Vvi6g0975	610	Gene3D	-	80	157	IPR023278	GO:0003700\|GO:0005634
Vvi6g0975	610	SUPERFAMILY	DNA-binding domain of EIN3-like	174	298	IPR023278	GO:0003700\|GO:0005634
Vvi6g0975	610	Gene3D	-	172	305	IPR023278	GO:0003700\|GO:0005634
Vvi6g0975	610	FunFam	Ethylene insensitive 3-like 1	80	158	-	-
Vvi6g0975	610	MobiDBLite	consensus disorder prediction	66	91	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi6g0975	Vvi-Chr6	13082072	13083904	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi6g0975	2	610	EIL Transcription Factor Family	AT3G20770	56.923	0.0	671

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	EIL	Vvi6g0975		EIN3	4.2e-130	No_clan

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi6g0975	K14514		-	vvi:100256432	1221.45

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