Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0966 ATGGCTAATTTCTCTTTTCTTCAACTTGTTTACATAGTGTATCTTGGATCCCTTCGTGAAGGGGAATTCTCACCATTGTCTCAACACCTTAGCATTCTTGACACCGTTCTTGATGGAAGTTCTTCAAAGGACTCCTTAGTAAGAAGCTATAAAAGGAGTTTCAATGGATTCGCAGCTCATCTCACGGACAAACAAATAGAAAAAGTGGCTAGCATGGAGGGAGTGGTGTCTATTTTCCCAAATAGACTTCTCCAACTTCACACAACCAGATCTTGGGACTTCATGGGATTTTCTGAAACCGTTAAACGGAATCCCACGGTTGAGAGTGATACTATTATAGGTGTTATTGACTCTGGAATCTGGCCTGAATTACAAAGCTTTAGTGATGAAGGTTTTAGTTCAATTCCAAAAAAATGGAAAGGTGTTTGTCAAGGCGGCAAAAATTTCACTTGCAACAAGAAGGTAATTGGAGCTCGAGCATACAATTCAATTGATAAAAATGATGATTCTGCAAGGGACACTGTCGGTCATGGAACCCACACAGCCTCCACAGCAGCTGGCAACATAGTAGAGGATGCGAGCTTTTTTGGGGTGGCATCAGGAAATGCAAGAGGAGGGGTTCCTTCTGCAAGAATAGCCGTGTACAAAGTTTGTACTGCAGATGGATGCACCATTGCAGATATCTTGGCTGGCTTCGATGATGCCATTTCTGATGGGGTTGACATCATTACTGTATCATTAGGATCCGTTGCTGGAGCCTTTTTTTTGGATAAGGACCCCATAGCAATTGGTTCTTTTCATGCTATGGTGAAAGGTATTTTAACATTGAATTCTGCAGGAAATAATGGTCCATCACCAGGTTCAGTCCTAAGCATCGCTCCATGGATGGTCAGTGTAGCTGCAAGCACCACAGACCGTGAAATTATTACCAAGGTTGTTCTTGGGGATGGAAAAATAATAAATGGTCATTCAATCAATTCTTTTGTGTTGAATGGAACCAAGTTTCCCCTTGTAGATGGGAAAAAGGCTGGTTTAACTAATAATAGTGATTGTGTTACTTATCCTACTCTGGATTGTGAAATAGACTGTCTAGTGGAAAGCAAAACAACCGGAAATATTTTACTGTGTAGAGGCCCTGGGCTAGATGTGCCTCTAAAGTTTGGGGCCGTTGGCATAATCAGACCAGATTTAGGTCGTTCTATATACCCGTTGCCAGCATCAGATTTAGAGGAACAAGAATTTGCAATGGTCGAGGCCTACATCAACTCCACCAAAAAACCAGAAGCGGATATATTGAGAAGTGATTCCATCAAAAATGTTTCTGCTCCTATGCTAGCTTCATTTTCAGGACGAGGGCCAAGCAGTCTCCTAGCTGAGATTATAAAGCCAGATATAAGTGCTCCCGGAGTAGATATCTTGGCGGCATTTTCCCCAGTTGCTCCAATTACAGAGTCCCTGGATGACAAAAGGAGAGCTAAGTACAGTATAATATCGGGAACATCCATGTCTTGCCCCCATGCTGCTGGAGCTGCTGCTTATGTTAAGACTTTCCACCCAGACTGGTCTCCTTCCGCCATCCGATCTGCCCTTATGACTACTGCCTGGCCCATGAATGCTACTGCAAATCCAGCTGCTGAATTTGGTTACGGATCTGGGCATATTAATCCAGTGAAAGCCATAAATCCTGGTCTGGTTTATGAAGCCTTTAAAGATGACTACATAAAGATGATGTGCGGACTAGGCTTTGACGCAGAGAAGGTAAGGCTCATATCAGGAGACAACACTACCACTTGTACTACAGGTGTTACCCAAGGCGCTGTAAGGGATCTCAACTATCCTTCCATGGCATCTACAGCCGACCAACACAAGCCTTTTAACATTAGATTTCCAAGAACAGTTACCAATGTTGGCCAGGCAAATTCCACTTACCAAGCAAAGATCACTGCAGATCCTCTCATGAAAGTCCAAGTAAATCCTAACGTTCTCTCCTTCACATCATTAAATGAGAAAAAAACTTTTGTGGTAACAGTTTCAGGAGAAGCATTGGATAAACAACCCAACGTATCTGCATCGCTGGTGTGGACCGATGGCACTCATAGTGTGAGGAGTCCCATTTTTATCTATCAACTTCCCTCAACCTGA 2142 0.4304 MANFSFLQLVYIVYLGSLREGEFSPLSQHLSILDTVLDGSSSKDSLVRSYKRSFNGFAAHLTDKQIEKVASMEGVVSIFPNRLLQLHTTRSWDFMGFSETVKRNPTVESDTIIGVIDSGIWPELQSFSDEGFSSIPKKWKGVCQGGKNFTCNKKVIGARAYNSIDKNDDSARDTVGHGTHTASTAAGNIVEDASFFGVASGNARGGVPSARIAVYKVCTADGCTIADILAGFDDAISDGVDIITVSLGSVAGAFFLDKDPIAIGSFHAMVKGILTLNSAGNNGPSPGSVLSIAPWMVSVAASTTDREIITKVVLGDGKIINGHSINSFVLNGTKFPLVDGKKAGLTNNSDCVTYPTLDCEIDCLVESKTTGNILLCRGPGLDVPLKFGAVGIIRPDLGRSIYPLPASDLEEQEFAMVEAYINSTKKPEADILRSDSIKNVSAPMLASFSGRGPSSLLAEIIKPDISAPGVDILAAFSPVAPITESLDDKRRAKYSIISGTSMSCPHAAGAAAYVKTFHPDWSPSAIRSALMTTAWPMNATANPAAEFGYGSGHINPVKAINPGLVYEAFKDDYIKMMCGLGFDAEKVRLISGDNTTTCTTGVTQGAVRDLNYPSMASTADQHKPFNIRFPRTVTNVGQANSTYQAKITADPLMKVQVNPNVLSFTSLNEKKTFVVTVSGEALDKQPNVSASLVWTDGTHSVRSPIFIYQLPST* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0966 713 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 7 87 IPR037045 -
Vvi6g0966 713 PRINTS Subtilisin serine protease family (S8) signature 108 127 IPR015500 -
Vvi6g0966 713 PRINTS Subtilisin serine protease family (S8) signature 173 186 IPR015500 -
Vvi6g0966 713 PRINTS Subtilisin serine protease family (S8) signature 498 514 IPR015500 -
Vvi6g0966 713 Pfam Subtilase family 109 550 IPR000209 GO:0006508|GO:0008236
Vvi6g0966 713 SUPERFAMILY Subtilisin-like 91 561 IPR036852 GO:0004252|GO:0006508
Vvi6g0966 713 ProSitePatterns Serine proteases, subtilase family, serine active site. 499 509 IPR023828 -
Vvi6g0966 713 Gene3D Peptidase S8/S53 domain 110 573 IPR036852 GO:0004252|GO:0006508
Vvi6g0966 713 ProSiteProfiles Serine proteases, subtilase domain profile. 91 560 - -
Vvi6g0966 713 FunFam Subtilisin-like protease SBT1.5 110 317 - -
Vvi6g0966 713 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 11 705 IPR045051 -
Vvi6g0966 713 Gene3D - 577 710 - -
Vvi6g0966 713 Pfam Fibronectin type-III domain 609 707 IPR041469 -
Vvi6g0966 713 CDD Peptidases_S8_3 84 535 IPR034197 -
Vvi6g0966 713 CDD PA_subtilisin_like 312 431 - -
Vvi6g0966 713 Gene3D - 305 438 - -
Vvi6g0966 713 Pfam Peptidase inhibitor I9 10 87 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0966 Vvi-Chr6 12931174 12934461 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0966 8 710 Subtilisin-like Serine Gene Family AT5G59100 54.825 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0966 - - vvi:100266702 1403.65