Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0963 ATGCAGGTTTACATAGTGTATCTTGGATCCCTTCGTGAAGGGGAATCCTCACCATTGTCCCAACACCTTAGCATTCTTGAAACTGCTCTTGATGGAAGTTCTTCAAAAGACTCCTTGTTAAGAAGCTATAAAAGGAGTTTCAATGGATTTGCAGCTCAGCTCACGGAAAACCAAAGAGAAAGAGTGGCTAGCATGGAGGGAGTGGTGTCTATTTTCCCAAATGGACTTCTCCAACTTCACACAACAAGATCTTGGGACTTCATGGGATTGTCTGAAACCGTTAAACGGAATCCCACTGTTGAGAGTGATACTATTATAGGTGTTATTGACTCTGGAATCTGGCCTGAATCACAAAGCTTTAGTGATGAAGGTTTTAGTTCAATTCCAAAAAAATGGAAAGGTGTATGTCAAGGCGGCAAAAATTTCACTTGCAACAAGAAGGTAATTGGAGCTCGAACATACATTTATGATGATTCTGCAAGGGACCCTATCGGTCATGGAACCCACACAGCCTCCACAGCAGCTGGCAACAAAGTAGAAGATGTGAGCTTTTTTGAGCTGGCACAAGGAAATGCAAGAGGAGGGGTTCCTTCTGCAAGAATAGCTGTGTACAAAGTTTGTTCTGAATACGGATGCCAGAGTGCAGATATCTTGGCTGCCTTCGACGATGCCATTTCTGATGGGGTTGACATCATTACCGTATCATTAGGACCCGCTTCTGGAGCCACTCCTTTGGATGCGGACCCCATAGCAATTGGTGCTTTTCATGCTATGGTGAAAGGTATTTTAACATTGAATTCTGCAGGAAATAGTGGTCCATCACCAGGTTCAGTCGGAAGCGTTGCTCCATGGATGGTCAGTGTAGCTGCAAGCACCACTGACCGTGCATTTGTCACCAAGGTTGTTCTTGGGGATGGAAAAATAATAAATGGTCGTTCAATTAATACTTTTGCGTTGAATGGAACCAAGTTTCCCCTTGTATATGGGAAAGTTCTTCCAAATTCTAGTGTTTGTCATAACAATCCTGCCCTGGATTGTGATGTACCCTGTCTACAGAAAATTATAGCAAACGGAAATATTTTACTGTGTAGAAGCCCTGTAGTAAATGTGGCTCTAGGTTTTGGAGCCCGTGGCGTAATCAGACGAGAAGACGGTCGTTCTATATTCCCCTTGCCTGTATCAGATTTAGGGGAACAAGAATTTGCAATGGTTGAGGCCTACGCCAATTCCACCGAAAAAGCAGAAGCGGACATATTGAAAAGTGAGTCCATCAAAGATCTTTCTGCGCCTATGCTGGCTTCATTTTCATCACGAGGGCCAAGCAATATCATAGCTGAGATTATAAAGCCAGATATAAGTGCTCCCGGAGTAAATATCTTGGCGGCATTTTCCCCAATTGTTCCAATCATGAAGTACGACAAGAGGAGAGCTAAATACAGTATGCTATCAGGAACGTCCATGTCTTGCCCCCATGCTGCTGGAGCTGCTGCTTATGTTAAGACTTTCCACCCAGACTGGTCTCCTTCCGCCATCCGATCTGCTCTTATGACTACTGCCTGGCCCATGAATGCTACTGCAAATCCAGCTGCTGAATTTGGCTATGGATCTGGGCATATTAATCCAGCGCAAGCCATAGATCCTGGTCTGGTTTATGAAGCCTTTAAGGATGACTACACAAAGATGATGTGCGGAATGGGCTATGACACAAGGACAGTAAGGCTCATATCAGGAGACAACACTACCACTTGTACTACAGGTGTTACTGAAGGTGCCGTAAAGGATCTCAACTATCCTTCCATGGCATCTCCAGCTGACCAACACAAGCCTTTTAACATTAGTTTTCTGAGAACAGTTACCAATGTTGGCCAGGCCAATTCTACTTACCAAGCAAAGATCACTGCAGATCCTCTCATGAAAGTCCAAGTAAATCCTAACGTTCTCTCCTTCACCTCATTAAATGAGAAAAAATCTTTAGTGGTAACGGTTTCAGGAGAAGCATTGGATAAACAACCAAAGGTATCTGCATCGCTGGTGTGGACCGATGGCACTCATAGTGTGAGAAGTCCCATTGTTATCTACCAACTTTCCTCAACATGA 2097 0.4406 MQVYIVYLGSLREGESSPLSQHLSILETALDGSSSKDSLLRSYKRSFNGFAAQLTENQRERVASMEGVVSIFPNGLLQLHTTRSWDFMGLSETVKRNPTVESDTIIGVIDSGIWPESQSFSDEGFSSIPKKWKGVCQGGKNFTCNKKVIGARTYIYDDSARDPIGHGTHTASTAAGNKVEDVSFFELAQGNARGGVPSARIAVYKVCSEYGCQSADILAAFDDAISDGVDIITVSLGPASGATPLDADPIAIGAFHAMVKGILTLNSAGNSGPSPGSVGSVAPWMVSVAASTTDRAFVTKVVLGDGKIINGRSINTFALNGTKFPLVYGKVLPNSSVCHNNPALDCDVPCLQKIIANGNILLCRSPVVNVALGFGARGVIRREDGRSIFPLPVSDLGEQEFAMVEAYANSTEKAEADILKSESIKDLSAPMLASFSSRGPSNIIAEIIKPDISAPGVNILAAFSPIVPIMKYDKRRAKYSMLSGTSMSCPHAAGAAAYVKTFHPDWSPSAIRSALMTTAWPMNATANPAAEFGYGSGHINPAQAIDPGLVYEAFKDDYTKMMCGMGYDTRTVRLISGDNTTTCTTGVTEGAVKDLNYPSMASPADQHKPFNISFLRTVTNVGQANSTYQAKITADPLMKVQVNPNVLSFTSLNEKKSLVVTVSGEALDKQPKVSASLVWTDGTHSVRSPIVIYQLSST* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0963 698 Pfam Subtilase family 102 535 IPR000209 GO:0006508|GO:0008236
Vvi6g0963 698 Gene3D - 294 425 - -
Vvi6g0963 698 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 80 IPR037045 -
Vvi6g0963 698 ProSitePatterns Serine proteases, subtilase family, serine active site. 484 494 IPR023828 -
Vvi6g0963 698 ProSiteProfiles Serine proteases, subtilase domain profile. 84 545 - -
Vvi6g0963 698 Pfam Fibronectin type-III domain 594 692 IPR041469 -
Vvi6g0963 698 Gene3D - 562 695 - -
Vvi6g0963 698 Gene3D Peptidase S8/S53 domain 103 558 IPR036852 GO:0004252|GO:0006508
Vvi6g0963 698 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 691 IPR045051 -
Vvi6g0963 698 CDD Peptidases_S8_3 77 520 IPR034197 -
Vvi6g0963 698 Pfam Peptidase inhibitor I9 3 80 IPR010259 -
Vvi6g0963 698 PRINTS Subtilisin serine protease family (S8) signature 483 499 IPR015500 -
Vvi6g0963 698 PRINTS Subtilisin serine protease family (S8) signature 101 120 IPR015500 -
Vvi6g0963 698 PRINTS Subtilisin serine protease family (S8) signature 162 175 IPR015500 -
Vvi6g0963 698 SUPERFAMILY Subtilisin-like 84 546 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0963 Vvi-Chr6 12884023 12887018 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0963 2 696 Subtilisin-like Serine Gene Family AT5G59100 55.119 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0963 - - vvi:100241012 1367.83