Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0955 ATGGATGTAGATTCAAATATCCGAACTTACCCTGACATCAGTGAGCGAGCTTTTGGGAACAATGGAAAAATGATCGTCTCAATTCTCATGTCTATAGAGCTGTACCTGGTGGCAACAGGGTTCCTAATTCTAGAAGGAGATAACTTACAGAATTTATTTCCAAACATAGGGTTTGAAATTTTAGGCCTAAGAATTGGAGGGAAGCAAAGCTTCACAATAATCGTTGGCCTTATCGTTTTGCCCTCGGTCTGGTTCGACAACATGAGTATTCTTTCTTATATCTCAGTAAGTGGTATTTTAGCTTGTGTTATCATCATTGGATCGATTTTGTGGGTTGGTGCATTTGATGGAGTTGGATTTCATGGAACACAAACAATTCTAAATTGGAGTGGAATTCCCACGTCTCTCAGCTTATATACTTTTTGTTTCTCCGCTCATCTAGTCTTTCCTACGCTCTACACTTCCATGAAAGACAAACGTCGCTTCTCAAATGCCTTGGCTATTTGCTATCTCTTCTGTACGATTACTTACACATCAATGGCAACTTTGGGATGCTTAATGTTTGGGTCCAAGGTACAATCTCAGATAACTTTAAATCTCCCAATCGATAAACTCAGCTCTAGAGTTGCAGTATACACCACTCTGATCAGTCCCCTATCAAAATATGCATTGATGGTTAGACCAATTTTGGATGCTACTGAAAACTGGTTTCCATGTGACTACTCCAAAAGTCCCTTAAGATTTGTAATGAAGACCAGCTTGGTGATCAGCACCATTGTTGCAGCCCTGGCACTCCCTTTTTTCGGATATCTCATGTCGATAGTTGGAGCATGTTTGAGTGTCACAGCTTCAATTTTGCTTCCATGCTTATGCTACTTGAAGATTTCTGGCACTTACAGAAGATTTGGATTTGAGTTGGTGATTATAGGGGGGATTATGCTAATGGGTATTTTAGTTGCAGTATTGGGTACATATACATCTCTAGTACAGCTAATAGAGCATTTGTAA 1008 0.3968 MDVDSNIRTYPDISERAFGNNGKMIVSILMSIELYLVATGFLILEGDNLQNLFPNIGFEILGLRIGGKQSFTIIVGLIVLPSVWFDNMSILSYISVSGILACVIIIGSILWVGAFDGVGFHGTQTILNWSGIPTSLSLYTFCFSAHLVFPTLYTSMKDKRRFSNALAICYLFCTITYTSMATLGCLMFGSKVQSQITLNLPIDKLSSRVAVYTTLISPLSKYALMVRPILDATENWFPCDYSKSPLRFVMKTSLVISTIVAALALPFFGYLMSIVGACLSVTASILLPCLCYLKISGTYRRFGFELVIIGGIMLMGILVAVLGTYTSLVQLIEHL* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0955 335 PANTHER OS05G0424000 PROTEIN-RELATED 8 321 - -
Vvi6g0955 335 Pfam Transmembrane amino acid transporter protein 4 300 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0955 Vvi-Chr6 12685893 12687431 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0955 1 332 Amino Acid or Auxin Permease AAAP Family AT3G28960 57.958 2.00e-147 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0955 K15015 - vvi:100253027 657.521