Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0951 ATGAGTTTTTCGGCATGCATTTTATGCTTGATTCTTAACCCATTTTCCTTCACTCACCACACTCGTCATCATATCAAATCACCTTCAACTCGCCCCACTACTGCTGCACTGGAAGCTTTAGGAGTCCGCAGTCCTGCAAGCCTCCTCCTCTCCCCATCCAACACCTTCATGGTCGACACTCTCCAACACCCTTACCCTAAGATTTTAGCCTATTACTATACCAGAGTGGCTTGCCATGGCGTCGTCGCTAGCGACTGGCTCGCCCAAGCCCAAGCCGTCATTGGCCGCCACCATGATGATCTCCCGCCCCCTAAGGTTGAAGATTCCAATAAGCCTTTTAGCATCATCGATGAGTTCAATAGCTGGTGGAAGCACCCCGATTTAGCCGAGGCGGTGGTTGCGTTTCGCGCTTTGGCATTGGTGATTTGGTCCAGCCAGGCTACCATCATGATGGAACTGGAGATTGAGCTCAAGAAGGTCTCTGATTCTCTTAAAAATATAGGACACAACCTTCATCTCTTTGACGGTTGGTTGCGATCTATTCATGCGATATGTAACAAAAACTTCCGCTTTAGAACATGA 582 0.4863 MSFSACILCLILNPFSFTHHTRHHIKSPSTRPTTAALEALGVRSPASLLLSPSNTFMVDTLQHPYPKILAYYYTRVACHGVVASDWLAQAQAVIGRHHDDLPPPKVEDSNKPFSIIDEFNSWWKHPDLAEAVVAFRALALVIWSSQATIMMELEIELKKVSDSLKNIGHNLHLFDGWLRSIHAICNKNFRFRT* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0951 193 Gene3D - 111 186 IPR042528 -
Vvi6g0951 193 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 79 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0951 Vvi-Chr6 12550599 12551180 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0951 43 166 Eukaryotic Initiation Factors Gene Family AT1G72340 52.632 1.29e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0951 K03239 - vvi:100244672 183.341